Similar articles for PMID: 18793462

Year	Number of Results
1858	1
1917	1
1941	1
1988	1
2003	2
2004	5
2005	10
2006	18
2007	22
2008	39
2009	38
2010	36
2011	29
2012	30
2013	18
2014	19
2015	4
2016	3
2017	3
2018	1
2019	1
2021	7
2022	10
2023	3
2024	0

1

Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples.

Hong H, Su Z, Ge W, Shi L, Perkins R, Fang H, Xu J, Chen JJ, Han T, Kaput J, Fuscoe JC, Tong W. Hong H, et al. BMC Bioinformatics. 2008 Aug 12;9 Suppl 9(Suppl 9):S17. doi: 10.1186/1471-2105-9-S9-S17. BMC Bioinformatics. 2008. PMID: 18793462 Free PMC article.

2

Evaluating variations of genotype calling: a potential source of spurious associations in genome-wide association studies.

Hong H, Su Z, Ge W, Shi L, Perkins R, Fang H, Mendrick D, Tong W. Hong H, et al. J Genet. 2010 Apr;89(1):55-64. doi: 10.1007/s12041-010-0011-4. J Genet. 2010. PMID: 20505247 Free article.

3

Batch effects in the BRLMM genotype calling algorithm influence GWAS results for the Affymetrix 500K array.

Miclaus K, Wolfinger R, Vega S, Chierici M, Furlanello C, Lambert C, Hong H, Zhang L, Yin S, Goodsaid F. Miclaus K, et al. Pharmacogenomics J. 2010 Aug;10(4):336-46. doi: 10.1038/tpj.2010.36. Pharmacogenomics J. 2010. PMID: 20676071

4

SNiPer: improved SNP genotype calling for Affymetrix 10K GeneChip microarray data.

Huentelman MJ, Craig DW, Shieh AD, Corneveaux JJ, Hu-Lince D, Pearson JV, Stephan DA. Huentelman MJ, et al. BMC Genomics. 2005 Oct 31;6:149. doi: 10.1186/1471-2164-6-149. BMC Genomics. 2005. PMID: 16262895 Free PMC article.

5

SNiPer-HD: improved genotype calling accuracy by an expectation-maximization algorithm for high-density SNP arrays.

Hua J, Craig DW, Brun M, Webster J, Zismann V, Tembe W, Joshipura K, Huentelman MJ, Dougherty ER, Stephan DA. Hua J, et al. Bioinformatics. 2007 Jan 1;23(1):57-63. doi: 10.1093/bioinformatics/btl536. Epub 2006 Oct 24. Bioinformatics. 2007. PMID: 17062589

6

Assessing consistency between versions of genotype-calling algorithm Birdseed for the Genome-Wide Human SNP Array 6.0 using HapMap samples.

Hong H, Xu L, Tong W. Hong H, et al. Adv Exp Med Biol. 2010;680:355-60. doi: 10.1007/978-1-4419-5913-3_40. Adv Exp Med Biol. 2010. PMID: 20865519

7

A genotype calling algorithm for the Illumina BeadArray platform.

Teo YY, Inouye M, Small KS, Gwilliam R, Deloukas P, Kwiatkowski DP, Clark TG. Teo YY, et al. Bioinformatics. 2007 Oct 15;23(20):2741-6. doi: 10.1093/bioinformatics/btm443. Epub 2007 Sep 10. Bioinformatics. 2007. PMID: 17846035 Free PMC article.

8

Dynamic model based algorithms for screening and genotyping over 100 K SNPs on oligonucleotide microarrays.

Di X, Matsuzaki H, Webster TA, Hubbell E, Liu G, Dong S, Bartell D, Huang J, Chiles R, Yang G, Shen MM, Kulp D, Kennedy GC, Mei R, Jones KW, Cawley S. Di X, et al. Bioinformatics. 2005 May 1;21(9):1958-63. doi: 10.1093/bioinformatics/bti275. Epub 2005 Jan 18. Bioinformatics. 2005. PMID: 15657097

9

A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.

Xiao Y, Segal MR, Yang YH, Yeh RF. Xiao Y, et al. Bioinformatics. 2007 Jun 15;23(12):1459-67. doi: 10.1093/bioinformatics/btm131. Epub 2007 Apr 25. Bioinformatics. 2007. PMID: 17459966

10

Assessing sources of inconsistencies in genotypes and their effects on genome-wide association studies with HapMap samples.

Hong H, Shi L, Su Z, Ge W, Jones WD, Czika W, Miclaus K, Lambert CG, Vega SC, Zhang J, Ning B, Liu J, Green B, Xu L, Fang H, Perkins R, Lin SM, Jafari N, Park K, Ahn T, Chierici M, Furlanello C, Zhang L, Wolfinger RD, Goodsaid F, Tong W. Hong H, et al. Pharmacogenomics J. 2010 Aug;10(4):364-74. doi: 10.1038/tpj.2010.24. Epub 2010 Apr 6. Pharmacogenomics J. 2010. PMID: 20368714 Free PMC article.

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