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Similar articles for PubMed (Select 18758767)

1.

Genome-scale reconstruction and in silico analysis of the Clostridium acetobutylicum ATCC 824 metabolic network.

Lee J, Yun H, Feist AM, Palsson BØ, Lee SY.

Appl Microbiol Biotechnol. 2008 Oct;80(5):849-62. doi: 10.1007/s00253-008-1654-4. Epub 2008 Aug 29.

PMID:
18758767
2.

Genome-scale modeling using flux ratio constraints to enable metabolic engineering of clostridial metabolism in silico.

McAnulty MJ, Yen JY, Freedman BG, Senger RS.

BMC Syst Biol. 2012 May 14;6:42. doi: 10.1186/1752-0509-6-42.

3.

Proteome reference map and comparative proteomic analysis between a wild type Clostridium acetobutylicum DSM 1731 and its mutant with enhanced butanol tolerance and butanol yield.

Mao S, Luo Y, Zhang T, Li J, Bao G, Zhu Y, Chen Z, Zhang Y, Li Y, Ma Y.

J Proteome Res. 2010 Jun 4;9(6):3046-61. doi: 10.1021/pr9012078.

PMID:
20426490
4.

Metabolic engineering of Clostridium acetobutylicum M5 for highly selective butanol production.

Lee JY, Jang YS, Lee J, Papoutsakis ET, Lee SY.

Biotechnol J. 2009 Oct;4(10):1432-40. doi: 10.1002/biot.200900142.

PMID:
19830716
5.

Genome-scale model for Clostridium acetobutylicum: Part I. Metabolic network resolution and analysis.

Senger RS, Papoutsakis ET.

Biotechnol Bioeng. 2008 Dec 1;101(5):1036-52. doi: 10.1002/bit.22010.

6.
7.

Genome-scale analysis of Mannheimia succiniciproducens metabolism.

Kim TY, Kim HU, Park JM, Song H, Kim JS, Lee SY.

Biotechnol Bioeng. 2007 Jul 1;97(4):657-71.

PMID:
17405177
8.

In silico genome-scale reconstruction and validation of the Corynebacterium glutamicum metabolic network.

Kjeldsen KR, Nielsen J.

Biotechnol Bioeng. 2009 Feb 1;102(2):583-97. doi: 10.1002/bit.22067.

PMID:
18985611
9.

Genome-scale metabolic modeling of a clostridial co-culture for consolidated bioprocessing.

Salimi F, Zhuang K, Mahadevan R.

Biotechnol J. 2010 Jul;5(7):726-38. doi: 10.1002/biot.201000159.

PMID:
20665645
10.

Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1.

Oberhardt MA, Puchałka J, Fryer KE, Martins dos Santos VA, Papin JA.

J Bacteriol. 2008 Apr;190(8):2790-803. doi: 10.1128/JB.01583-07. Epub 2008 Jan 11.

12.

Metabolic network reconstruction and genome-scale model of butanol-producing strain Clostridium beijerinckii NCIMB 8052.

Milne CB, Eddy JA, Raju R, Ardekani S, Kim PJ, Senger RS, Jin YS, Blaschek HP, Price ND.

BMC Syst Biol. 2011 Aug 16;5:130. doi: 10.1186/1752-0509-5-130.

13.

Metabolic engineering of Clostridium acetobutylicum: recent advances to improve butanol production.

Lütke-Eversloh T, Bahl H.

Curr Opin Biotechnol. 2011 Oct;22(5):634-47. doi: 10.1016/j.copbio.2011.01.011. Epub 2011 Mar 4. Review.

PMID:
21377350
14.

Genome-scale modeling and in silico analysis of mouse cell metabolic network.

Selvarasu S, Karimi IA, Ghim GH, Lee DY.

Mol Biosyst. 2010 Jan;6(1):152-61. doi: 10.1039/b912865d. Epub 2009 Sep 2.

PMID:
20024077
15.
16.

Disruption of the acetoacetate decarboxylase gene in solvent-producing Clostridium acetobutylicum increases the butanol ratio.

Jiang Y, Xu C, Dong F, Yang Y, Jiang W, Yang S.

Metab Eng. 2009 Jul-Sep;11(4-5):284-91. doi: 10.1016/j.ymben.2009.06.002. Epub 2009 Jun 26.

PMID:
19560551
17.

Genome-wide gene expression analysis of the switch between acidogenesis and solventogenesis in continuous cultures of Clostridium acetobutylicum.

Grimmler C, Janssen H, Krausse D, Fischer RJ, Bahl H, Dürre P, Liebl W, Ehrenreich A.

J Mol Microbiol Biotechnol. 2011;20(1):1-15. doi: 10.1159/000320973. Epub 2011 Jan 6.

18.

Enhanced butanol production obtained by reinforcing the direct butanol-forming route in Clostridium acetobutylicum.

Jang YS, Lee JY, Lee J, Park JH, Im JA, Eom MH, Lee J, Lee SH, Song H, Cho JH, Seung do Y, Lee SY.

MBio. 2012 Oct 23;3(5). pii: e00314-12. doi: 10.1128/mBio.00314-12.

20.

Comparative genomic and transcriptomic analysis revealed genetic characteristics related to solvent formation and xylose utilization in Clostridium acetobutylicum EA 2018.

Hu S, Zheng H, Gu Y, Zhao J, Zhang W, Yang Y, Wang S, Zhao G, Yang S, Jiang W.

BMC Genomics. 2011 Feb 2;12:93. doi: 10.1186/1471-2164-12-93.

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