Format
Sort by

Send to

Choose Destination

Links from PubMed

Items: 1 to 20 of 83

1.

Prediction of membrane protein types by means of wavelet analysis and cascaded neural networks.

Rezaei MA, Abdolmaleki P, Karami Z, Asadabadi EB, Sherafat MA, Abrishami-Moghaddam H, Fadaie M, Forouzanfar M.

J Theor Biol. 2008 Oct 21;254(4):817-20. doi: 10.1016/j.jtbi.2008.07.012. Epub 2008 Jul 17.

PMID:
18692511
2.

A neural network model for the prediction of membrane-spanning amino acid sequences.

Lohmann R, Schneider G, Behrens D, Wrede P.

Protein Sci. 1994 Sep;3(9):1597-601.

3.

Using amino acid and peptide composition to predict membrane protein types.

Yang XG, Luo RY, Feng ZP.

Biochem Biophys Res Commun. 2007 Feb 2;353(1):164-9. Epub 2006 Dec 8.

PMID:
17174938
4.

Prediction of helix-helix contacts and interacting helices in polytopic membrane proteins using neural networks.

Fuchs A, Kirschner A, Frishman D.

Proteins. 2009 Mar;74(4):857-71. doi: 10.1002/prot.22194.

PMID:
18704938
5.

OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar.

Viklund H, Elofsson A.

Bioinformatics. 2008 Aug 1;24(15):1662-8. doi: 10.1093/bioinformatics/btn221. Epub 2008 May 12.

6.

TMBETADISC-RBF: Discrimination of beta-barrel membrane proteins using RBF networks and PSSM profiles.

Ou YY, Gromiha MM, Chen SA, Suwa M.

Comput Biol Chem. 2008 Jun;32(3):227-31. doi: 10.1016/j.compbiolchem.2008.03.002. Epub 2008 Mar 18.

PMID:
18434251
7.

Discrimination of outer membrane proteins by a new measure of information discrepancy.

Wu Z, Feng E, Wang Y, Chen L.

Protein Pept Lett. 2007;14(1):37-44.

PMID:
17266649
8.
9.

Novel two-stage hybrid neural discriminant model for predicting proteins structural classes.

Jahandideh S, Abdolmaleki P, Jahandideh M, Asadabadi EB.

Biophys Chem. 2007 Jun;128(1):87-93. Epub 2007 Mar 13.

PMID:
17467878
10.

Prediction of membrane protein types from sequences and position-specific scoring matrices.

Pu X, Guo J, Leung H, Lin Y.

J Theor Biol. 2007 Jul 21;247(2):259-65. Epub 2007 Jan 30.

PMID:
17433369
11.

The extraction of information and knowledge from trained neural networks.

Livingstone DJ, Browne A, Crichton R, Hudson BD, Whitley DC, Ford MG.

Methods Mol Biol. 2008;458:231-48.

PMID:
19065813
12.

Cascaded bidirectional recurrent neural networks for protein secondary structure prediction.

Chen J, Chaudhari N.

IEEE/ACM Trans Comput Biol Bioinform. 2007 Oct-Dec;4(4):572-82.

PMID:
17975269
13.

A computational approach for the identification of small GTPases based on preprocessed amino acid sequences.

Heider D, Appelmann J, Bayro T, Dreckmann W, Held A, Winkler J, Barnekow A, Borschbach M.

Technol Cancer Res Treat. 2009 Oct;8(5):333-41.

PMID:
19754209
14.

Gamma-turn types prediction in proteins using the two-stage hybrid neural discriminant model.

Jahandideh S, Hoseini S, Jahandideh M, Hoseini A, Disfani FM.

J Theor Biol. 2009 Aug 7;259(3):517-22. doi: 10.1016/j.jtbi.2009.04.016. Epub 2009 May 3.

PMID:
19409396
15.

Prediction of signal peptides in protein sequences by neural networks.

Plewczynski D, Slabinski L, Ginalski K, Rychlewski L.

Acta Biochim Pol. 2008;55(2):261-7. Epub 2008 May 26.

16.

SOMPNN: an efficient non-parametric model for predicting transmembrane helices.

Yu DJ, Shen HB, Yang JY.

Amino Acids. 2012 Jun;42(6):2195-205. doi: 10.1007/s00726-011-0959-2. Epub 2011 Jun 22.

PMID:
21695537
17.

Using support vector machines for prediction of protein structural classes based on discrete wavelet transform.

Qiu JD, Luo SH, Huang JH, Liang RP.

J Comput Chem. 2009 Jun;30(8):1344-50. doi: 10.1002/jcc.21115.

PMID:
19009604
18.

An ensemble of support vector machines for predicting the membrane protein type directly from the amino acid sequence.

Nanni L, Lumini A.

Amino Acids. 2008 Oct;35(3):573-80. doi: 10.1007/s00726-008-0083-0. Epub 2008 Apr 22.

PMID:
18427715
19.

Classification of membrane protein types using Voting Feature Interval in combination with Chou's Pseudo Amino Acid Composition.

Ali F, Hayat M.

J Theor Biol. 2015 Nov 7;384:78-83. doi: 10.1016/j.jtbi.2015.07.034. Epub 2015 Aug 20.

PMID:
26297889
20.
Items per page

Supplemental Content

Write to the Help Desk