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Results: 1 to 20 of 159

1.

Stability of gene contributions and identification of outliers in multivariate analysis of microarray data.

Baty F, Jaeger D, Preiswerk F, Schumacher MM, Brutsche MH.

BMC Bioinformatics. 2008 Jun 20;9:289. doi: 10.1186/1471-2105-9-289.

PMID:
18570644
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Identification of differentially expressed gene categories in microarray studies using nonparametric multivariate analysis.

Nettleton D, Recknor J, Reecy JM.

Bioinformatics. 2008 Jan 15;24(2):192-201. Epub 2007 Nov 27.

PMID:
18042553
[PubMed - indexed for MEDLINE]
Free Article
3.

Significance of gene ranking for classification of microarray samples.

Zhang C, Lu X, Zhang X.

IEEE/ACM Trans Comput Biol Bioinform. 2006 Jul-Sep;3(3):312-20.

PMID:
17048468
[PubMed - indexed for MEDLINE]
4.

Increased power of microarray analysis by use of an algorithm based on a multivariate procedure.

Krohn K, Eszlinger M, Paschke R, Roeder I, Schuster E.

Bioinformatics. 2005 Sep 1;21(17):3530-4. Epub 2005 Jul 5.

PMID:
15998661
[PubMed - indexed for MEDLINE]
Free Article
5.

Analysis with respect to instrumental variables for the exploration of microarray data structures.

Baty F, Facompré M, Wiegand J, Schwager J, Brutsche MH.

BMC Bioinformatics. 2006 Sep 29;7:422.

PMID:
17010189
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

A new method for class prediction based on signed-rank algorithms applied to Affymetrix microarray experiments.

Rème T, Hose D, De Vos J, Vassal A, Poulain PO, Pantesco V, Goldschmidt H, Klein B.

BMC Bioinformatics. 2008 Jan 11;9:16. doi: 10.1186/1471-2105-9-16.

PMID:
18190711
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

New resampling method for evaluating stability of clusters.

Gana Dresen IM, Boes T, Huesing J, Neuhaeuser M, Joeckel KH.

BMC Bioinformatics. 2008 Jan 24;9:42. doi: 10.1186/1471-2105-9-42.

PMID:
18218074
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Fusing microarray experiments with multivariate regression.

Gilks WR, Tom BD, Brazma A.

Bioinformatics. 2005 Sep 1;21 Suppl 2:ii137-43.

PMID:
16204093
[PubMed - indexed for MEDLINE]
Free Article
9.

Creating gene set activity profiles with time-series expression data.

Knijnenburg TA, Wessels LF, Reinders MJ.

Int J Bioinform Res Appl. 2008;4(3):306-23.

PMID:
18640906
[PubMed - indexed for MEDLINE]
10.

WGCNA: an R package for weighted correlation network analysis.

Langfelder P, Horvath S.

BMC Bioinformatics. 2008 Dec 29;9:559. doi: 10.1186/1471-2105-9-559.

PMID:
19114008
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Estimation of gene induction enables a relevance-based ranking of gene sets.

Bartholomé K, Kreutz C, Timmer J.

J Comput Biol. 2009 Jul;16(7):959-67. doi: 10.1089/cmb.2008.0226.

PMID:
19580524
[PubMed - indexed for MEDLINE]
12.

Biclustering of microarray data with MOSPO based on crowding distance.

Liu J, Li Z, Hu X, Chen Y.

BMC Bioinformatics. 2009 Apr 29;10 Suppl 4:S9. doi: 10.1186/1471-2105-10-S4-S9.

PMID:
19426457
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

GeneSrF and varSelRF: a web-based tool and R package for gene selection and classification using random forest.

Diaz-Uriarte R.

BMC Bioinformatics. 2007 Sep 3;8:328.

PMID:
17767709
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Clustering algorithms and other exploratory methods for microarray data analysis.

Rahnenführer J.

Methods Inf Med. 2005;44(3):444-8.

PMID:
16113771
[PubMed - indexed for MEDLINE]
15.

Using generalized procrustes analysis (GPA) for normalization of cDNA microarray data.

Xiong H, Zhang D, Martyniuk CJ, Trudeau VL, Xia X.

BMC Bioinformatics. 2008 Jan 16;9:25. doi: 10.1186/1471-2105-9-25.

PMID:
18199333
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Multivariate exploratory tools for microarray data analysis.

Szabo A, Boucher K, Jones D, Tsodikov AD, Klebanov LB, Yakovlev AY.

Biostatistics. 2003 Oct;4(4):555-67.

PMID:
14557111
[PubMed - indexed for MEDLINE]
Free Article
17.

Identification of differentially expressed genes with multivariate outlier analysis.

Zhao HY, Yue PY, Fang KT.

J Biopharm Stat. 2004 Aug;14(3):629-46.

PMID:
15468756
[PubMed - indexed for MEDLINE]
18.

SEGS: search for enriched gene sets in microarray data.

Trajkovski I, Lavrac N, Tolar J.

J Biomed Inform. 2008 Aug;41(4):588-601. doi: 10.1016/j.jbi.2007.12.001. Epub 2007 Dec 15.

PMID:
18234563
[PubMed - indexed for MEDLINE]
Free Article
19.

Improving the power for detecting overlapping genes from multiple DNA microarray-derived gene lists.

Deng X, Xu J, Wang C.

BMC Bioinformatics. 2008 May 28;9 Suppl 6:S14. doi: 10.1186/1471-2105-9-S6-S14.

PMID:
18541049
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Robust detection and genotyping of single feature polymorphisms from gene expression data.

Wang M, Hu X, Li G, Leach LJ, Potokina E, Druka A, Waugh R, Kearsey MJ, Luo Z.

PLoS Comput Biol. 2009 Mar;5(3):e1000317. doi: 10.1371/journal.pcbi.1000317. Epub 2009 Mar 13.

PMID:
19282978
[PubMed - indexed for MEDLINE]
Free PMC Article

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