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Results: 1 to 20 of 111

Similar articles for PubMed (Select 18539128)

1.

Capillary electrophoretic analysis of methylation status in CpG-rich regions by single-base extension of primers modified with N6-methoxy-2,6-diaminopurine.

Boyd VL, Zon G.

Anal Biochem. 2008 Sep 1;380(1):13-20. doi: 10.1016/j.ab.2008.05.017. Epub 2008 May 20.

PMID:
18539128
2.

Methylation-dependent fragment separation: direct detection of DNA methylation by capillary electrophoresis of PCR products from bisulfite-converted genomic DNA.

Boyd VL, Moody KI, Karger AE, Livak KJ, Zon G, Burns JW.

Anal Biochem. 2006 Jul 15;354(2):266-73. Epub 2006 May 6.

PMID:
16725101
4.

Methylation-dependent fragment separation: novel analysis of 5-methyl cytosine by capillary electrophoresis of amplified DNA using PCR incorporation of chemically modified dCTP.

Boyd VL, Moody KI, Karger AE, Livak KJ, Zon G, Burns JW.

Nucleosides Nucleotides Nucleic Acids. 2007;26(6-7):629-34.

PMID:
18066869
5.

Formamide as a denaturant for bisulfite conversion of genomic DNA: Bisulfite sequencing of the GSTPi and RARbeta2 genes of 43 formalin-fixed paraffin-embedded prostate cancer specimens.

Zon G, Barker MA, Kaur P, Groshen S, Jones LW, Imam SA, Boyd VL.

Anal Biochem. 2009 Sep 15;392(2):117-25. doi: 10.1016/j.ab.2009.06.001. Epub 2009 Jun 6.

PMID:
19505431
6.

Single nucleotide extension technology for quantitative site-specific evaluation of metC/C in GC-rich regions.

Kaminsky ZA, Assadzadeh A, Flanagan J, Petronis A.

Nucleic Acids Res. 2005 Jun 15;33(10):e95.

8.

Methylation profiling using degenerated oligonucleotide primer-PCR specific for genome-wide amplification of bisulfite-modified DNA.

Yang WH, Wu JR, Wang TH, Au LC.

Anal Biochem. 2007 Oct 1;369(1):120-7. Epub 2007 Jun 16.

PMID:
17663982
9.

Methylation SNaPshot: a method for the quantification of site-specific DNA methylation levels.

Kaminsky Z, Petronis A.

Methods Mol Biol. 2009;507:241-55. doi: 10.1007/978-1-59745-522-0_18.

PMID:
18987819
10.

Sequence context analysis of 8.2 million single nucleotide polymorphisms in the human genome.

Zhao Z, Zhang F.

Gene. 2006 Feb 1;366(2):316-24. Epub 2005 Nov 28.

PMID:
16314054
11.
12.

PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands.

Srivastava GP, Guo J, Shi H, Xu D.

Bioinformatics. 2008 Sep 1;24(17):1837-42. doi: 10.1093/bioinformatics/btn320. Epub 2008 Jun 25.

13.

DNA methylation analysis by bisulfite conversion, cloning, and sequencing of individual clones.

Zhang Y, Rohde C, Tierling S, Stamerjohanns H, Reinhardt R, Walter J, Jeltsch A.

Methods Mol Biol. 2009;507:177-87. doi: 10.1007/978-1-59745-522-0_14.

PMID:
18987815
14.
15.

CpG mutation rates in the human genome are highly dependent on local GC content.

Fryxell KJ, Moon WJ.

Mol Biol Evol. 2005 Mar;22(3):650-8. Epub 2004 Nov 10. Erratum in: Mol Biol Evol. 2005 Apr;22(4):1159.

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18.

Microarray-based method to analyze methylation status of E-cadherin gene in leukemia.

Zheng W, Wang Y, Luo J, Zhang F, Chen B, Lu Z.

Clin Chim Acta. 2008 Jan;387(1-2):97-104. Epub 2007 Sep 29.

PMID:
17964562
19.

MethylQuant: a real-time PCR-based method to quantify DNA methylation at single specific cytosines.

Dugast-Darzacq C, Grange T.

Methods Mol Biol. 2009;507:281-303. doi: 10.1007/978-1-59745-522-0_21.

PMID:
18987822
20.

Evaluation of a potential epigenetic biomarker by quantitative methyl-single nucleotide polymorphism analysis.

Uhlmann K, Brinckmann A, Toliat MR, Ritter H, N├╝rnberg P.

Electrophoresis. 2002 Dec;23(24):4072-9.

PMID:
12481262
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