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Results: 1 to 20 of 114

1.

K2D2: estimation of protein secondary structure from circular dichroism spectra.

Perez-Iratxeta C, Andrade-Navarro MA.

BMC Struct Biol. 2008 May 13;8:25. doi: 10.1186/1472-6807-8-25.

PMID:
18477405
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Prediction of protein secondary structure from circular dichroism using theoretically derived spectra.

Louis-Jeune C, Andrade-Navarro MA, Perez-Iratxeta C.

Proteins. 2011 Sep 14. doi: 10.1002/prot.23188. [Epub ahead of print]

PMID:
22095872
[PubMed - as supplied by publisher]
3.

Estimation of the number of alpha-helical and beta-strand segments in proteins using circular dichroism spectroscopy.

Sreerama N, Venyaminov SY, Woody RW.

Protein Sci. 1999 Feb;8(2):370-80.

PMID:
10048330
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data.

Whitmore L, Wallace BA.

Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W668-73.

PMID:
15215473
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

DichroMatch: a website for similarity searching of circular dichroism spectra.

Klose DP, Wallace BA, Janes RW.

Nucleic Acids Res. 2012 Jul;40(Web Server issue):W547-52. doi: 10.1093/nar/gks449. Epub 2012 May 25.

PMID:
22638573
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

DICHROWEB: an interactive website for the analysis of protein secondary structure from circular dichroism spectra.

Lobley A, Whitmore L, Wallace BA.

Bioinformatics. 2002 Jan;18(1):211-2.

PMID:
11836237
[PubMed - indexed for MEDLINE]
Free Article
7.

SOMCD: method for evaluating protein secondary structure from UV circular dichroism spectra.

Unneberg P, Merelo JJ, Chacón P, Morán F.

Proteins. 2001 Mar 1;42(4):460-70.

PMID:
11170201
[PubMed - indexed for MEDLINE]
8.

Secondary-structure analysis of proteins by vacuum-ultraviolet circular dichroism spectroscopy.

Matsuo K, Yonehara R, Gekko K.

J Biochem. 2004 Mar;135(3):405-11.

PMID:
15113839
[PubMed - indexed for MEDLINE]
Free Article
9.

An interactive graphic program for calculating the secondary structure content of proteins from circular dichroism spectrum.

Deléage G, Geourjon C.

Comput Appl Biosci. 1993 Apr;9(2):197-9.

PMID:
8481823
[PubMed - indexed for MEDLINE]
10.

Novel methods for secondary structure determination using low wavelength (VUV) circular dichroism spectroscopic data.

Lees JG, Miles AJ, Janes RW, Wallace BA.

BMC Bioinformatics. 2006 Nov 17;7:507.

PMID:
17112372
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Protein secondary structure from Fourier transform infrared and/or circular dichroism spectra.

Pribić R, van Stokkum IH, Chapman D, Haris PI, Bloemendal M.

Anal Biochem. 1993 Nov 1;214(2):366-78.

PMID:
8109723
[PubMed - indexed for MEDLINE]
12.

Analyzing protein circular dichroism spectra for accurate secondary structures.

Johnson WC.

Proteins. 1999 May 15;35(3):307-12.

PMID:
10328265
[PubMed - indexed for MEDLINE]
13.

Bioinformatics analyses of circular dichroism protein reference databases.

Janes RW.

Bioinformatics. 2005 Dec 1;21(23):4230-8. Epub 2005 Sep 27.

PMID:
16188926
[PubMed - indexed for MEDLINE]
Free Article
14.

CAPITO--a web server-based analysis and plotting tool for circular dichroism data.

Wiedemann C, Bellstedt P, Görlach M.

Bioinformatics. 2013 Jul 15;29(14):1750-7. doi: 10.1093/bioinformatics/btt278. Epub 2013 May 15.

PMID:
23681122
[PubMed - indexed for MEDLINE]
Free Article
15.

Improved sequence-based prediction of protein secondary structures by combining vacuum-ultraviolet circular dichroism spectroscopy with neural network.

Matsuo K, Watanabe H, Gekko K.

Proteins. 2008 Oct;73(1):104-12. doi: 10.1002/prot.22055.

PMID:
18395813
[PubMed - indexed for MEDLINE]
16.

Elucidating protein secondary structure with circular dichroism and a neural network.

Hall V, Nash A, Hines E, Rodger A.

J Comput Chem. 2013 Dec 15;34(32):2774-86. doi: 10.1002/jcc.23456. Epub 2013 Oct 5.

PMID:
24122928
[PubMed - indexed for MEDLINE]
17.

A BASIC microcomputer program to calculate the secondary structure of proteins from their circular dichroism spectrum.

Menéndez-Arias L, Gómez-Gutiérrez J, García-Ferrández M, García-Tejedor A, Morán F.

Comput Appl Biosci. 1988 Nov;4(4):479-82.

PMID:
3208183
[PubMed - indexed for MEDLINE]
18.

Improved estimation of the secondary structures of proteins by vacuum-ultraviolet circular dichroism spectroscopy.

Matsuo K, Yonehara R, Gekko K.

J Biochem. 2005 Jul;138(1):79-88.

PMID:
16046451
[PubMed - indexed for MEDLINE]
19.

The protein circular dichroism data bank, a Web-based site for access to circular dichroism spectroscopic data.

Whitmore L, Woollett B, Miles AJ, Janes RW, Wallace BA.

Structure. 2010 Oct 13;18(10):1267-9. doi: 10.1016/j.str.2010.08.008.

PMID:
20947015
[PubMed - indexed for MEDLINE]
Free Article
20.

A reference database for circular dichroism spectroscopy covering fold and secondary structure space.

Lees JG, Miles AJ, Wien F, Wallace BA.

Bioinformatics. 2006 Aug 15;22(16):1955-62. Epub 2006 Jun 20.

PMID:
16787970
[PubMed - indexed for MEDLINE]
Free Article

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