Format
Items per page
Sort by

Send to:

Choose Destination

Results: 1 to 20 of 137

1.

High-throughput functional annotation and data mining with the Blast2GO suite.

Götz S, García-Gómez JM, Terol J, Williams TD, Nagaraj SH, Nueda MJ, Robles M, Talón M, Dopazo J, Conesa A.

Nucleic Acids Res. 2008 Jun;36(10):3420-35. doi: 10.1093/nar/gkn176. Epub 2008 Apr 29.

PMID:
18445632
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research.

Conesa A, Götz S, García-Gómez JM, Terol J, Talón M, Robles M.

Bioinformatics. 2005 Sep 15;21(18):3674-6. Epub 2005 Aug 4.

PMID:
16081474
[PubMed - indexed for MEDLINE]
Free Article
3.

B2G-FAR, a species-centered GO annotation repository.

Götz S, Arnold R, Sebastián-León P, Martín-Rodríguez S, Tischler P, Jehl MA, Dopazo J, Rattei T, Conesa A.

Bioinformatics. 2011 Apr 1;27(7):919-24. doi: 10.1093/bioinformatics/btr059. Epub 2011 Feb 18.

PMID:
21335611
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Large-scale Gene Ontology analysis of plant transcriptome-derived sequences retrieved by AFLP technology.

Botton A, Galla G, Conesa A, Bachem C, Ramina A, Barcaccia G.

BMC Genomics. 2008 Jul 24;9:347. doi: 10.1186/1471-2164-9-347.

PMID:
18652646
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Blast2GO: A comprehensive suite for functional analysis in plant genomics.

Conesa A, Götz S.

Int J Plant Genomics. 2008;2008:619832. doi: 10.1155/2008/619832.

PMID:
18483572
[PubMed]
Free PMC Article
6.

MILANO--custom annotation of microarray results using automatic literature searches.

Rubinstein R, Simon I.

BMC Bioinformatics. 2005 Jan 20;6:12.

PMID:
15661078
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Computational annotation of genes differentially expressed along olive fruit development.

Galla G, Barcaccia G, Ramina A, Collani S, Alagna F, Baldoni L, Cultrera NG, Martinelli F, Sebastiani L, Tonutti P.

BMC Plant Biol. 2009 Oct 24;9:128. doi: 10.1186/1471-2229-9-128.

PMID:
19852839
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

FunnyBase: a systems level functional annotation of Fundulus ESTs for the analysis of gene expression.

Paschall JE, Oleksiak MF, VanWye JD, Roach JL, Whitehead JA, Wyckoff GJ, Kolell KJ, Crawford DL.

BMC Genomics. 2004 Dec 20;5(1):96.

PMID:
15610557
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Functional and structural genomics using PEDANT.

Frishman D, Albermann K, Hani J, Heumann K, Metanomski A, Zollner A, Mewes HW.

Bioinformatics. 2001 Jan;17(1):44-57.

PMID:
11222261
[PubMed - indexed for MEDLINE]
Free Article
10.

GeneViTo: visualizing gene-product functional and structural features in genomic datasets.

Vernikos GS, Gkogkas CG, Promponas VJ, Hamodrakas SJ.

BMC Bioinformatics. 2003 Oct 31;4:53.

PMID:
14594459
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Blast2GO goes grid: developing a grid-enabled prototype for functional genomics analysis.

Aparicio G, Götz S, Conesa A, Segrelles D, Blanquer I, García JM, Hernandez V, Robles M, Talon M.

Stud Health Technol Inform. 2006;120:194-204.

PMID:
16823138
[PubMed - indexed for MEDLINE]
12.

Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data.

van den Berg BH, Thanthiriwatte C, Manda P, Bridges SM.

BMC Bioinformatics. 2009 Oct 8;10 Suppl 11:S9. doi: 10.1186/1471-2105-10-S11-S9.

PMID:
19811693
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

Algal Functional Annotation Tool: a web-based analysis suite to functionally interpret large gene lists using integrated annotation and expression data.

Lopez D, Casero D, Cokus SJ, Merchant SS, Pellegrini M.

BMC Bioinformatics. 2011 Jul 12;12:282. doi: 10.1186/1471-2105-12-282.

PMID:
21749710
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

GarlicESTdb: an online database and mining tool for garlic EST sequences.

Kim DW, Jung TS, Nam SH, Kwon HR, Kim A, Chae SH, Choi SH, Kim DW, Kim RN, Park HS.

BMC Plant Biol. 2009 May 18;9:61. doi: 10.1186/1471-2229-9-61.

PMID:
19445732
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

PROMPT: a protein mapping and comparison tool.

Schmidt T, Frishman D.

BMC Bioinformatics. 2006 Jul 4;7:331.

PMID:
16817977
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs).

Liang C, Wang G, Liu L, Ji G, Fang L, Liu Y, Carter K, Webb JS, Dean JF.

BMC Genomics. 2007 May 29;8:134.

PMID:
17535431
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

PESTAS: a web server for EST analysis and sequence mining.

Nam SH, Kim DW, Jung TS, Choi YS, Kim DW, Choi HS, Choi SH, Park HS.

Bioinformatics. 2009 Jul 15;25(14):1846-8. doi: 10.1093/bioinformatics/btp293. Epub 2009 May 4.

PMID:
19414531
[PubMed - indexed for MEDLINE]
Free Article
18.

JUICE: a data management system that facilitates the analysis of large volumes of information in an EST project workflow.

Latorre M, Silva H, Saba J, Guziolowski C, Vizoso P, Martinez V, Maldonado J, Morales A, Caroca R, Cambiazo V, Campos-Vargas R, Gonzalez M, Orellana A, Retamales J, Meisel LA.

BMC Bioinformatics. 2006 Nov 23;7:513.

PMID:
17123449
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

BMC Bioinformatics. 2006 Oct 24;7:470.

PMID:
17062145
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

AgBase: a functional genomics resource for agriculture.

McCarthy FM, Wang N, Magee GB, Nanduri B, Lawrence ML, Camon EB, Barrell DG, Hill DP, Dolan ME, Williams WP, Luthe DS, Bridges SM, Burgess SC.

BMC Genomics. 2006 Sep 8;7:229.

PMID:
16961921
[PubMed - indexed for MEDLINE]
Free PMC Article
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk