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Results: 1 to 20 of 68

1.

Network properties of genes harboring inherited disease mutations.

Feldman I, Rzhetsky A, Vitkup D.

Proc Natl Acad Sci U S A. 2008 Mar 18;105(11):4323-8. doi: 10.1073/pnas.0701722105. Epub 2008 Mar 7.

PMID:
18326631
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Network properties of human disease genes with pleiotropic effects.

Chavali S, Barrenas F, Kanduri K, Benson M.

BMC Syst Biol. 2010 Jun 4;4:78. doi: 10.1186/1752-0509-4-78.

PMID:
20525321
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

The human disease network.

Goh KI, Cusick ME, Valle D, Childs B, Vidal M, Barabási AL.

Proc Natl Acad Sci U S A. 2007 May 22;104(21):8685-90. Epub 2007 May 14.

PMID:
17502601
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles.

Prieto C, Risueño A, Fontanillo C, De las Rivas J.

PLoS One. 2008;3(12):e3911. doi: 10.1371/journal.pone.0003911. Epub 2008 Dec 15.

PMID:
19081792
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Genetic and systems level analysis of Drosophila sticky/citron kinase and dFmr1 mutants reveals common regulation of genetic networks.

Bauer CR, Epstein AM, Sweeney SJ, Zarnescu DC, Bosco G.

BMC Syst Biol. 2008 Nov 25;2:101. doi: 10.1186/1752-0509-2-101.

PMID:
19032789
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Highly consistent patterns for inherited human diseases at the molecular level.

López-Bigas N, Blencowe BJ, Ouzounis CA.

Bioinformatics. 2006 Feb 1;22(3):269-77. Epub 2005 Nov 15.

PMID:
16287936
[PubMed - indexed for MEDLINE]
Free Article
7.

Integrative analysis of RUNX1 downstream pathways and target genes.

Michaud J, Simpson KM, Escher R, Buchet-Poyau K, Beissbarth T, Carmichael C, Ritchie ME, Schütz F, Cannon P, Liu M, Shen X, Ito Y, Raskind WH, Horwitz MS, Osato M, Turner DR, Speed TP, Kavallaris M, Smyth GK, Scott HS.

BMC Genomics. 2008 Jul 31;9:363. doi: 10.1186/1471-2164-9-363.

PMID:
18671852
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

A dynamic network of transcription in LPS-treated human subjects.

Seok J, Xiao W, Moldawer LL, Davis RW, Covert MW.

BMC Syst Biol. 2009 Jul 28;3:78. doi: 10.1186/1752-0509-3-78.

PMID:
19638230
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Analysis of human disease genes in the context of gene essentiality.

Park D, Park J, Park SG, Park T, Choi SS.

Genomics. 2008 Dec;92(6):414-8. doi: 10.1016/j.ygeno.2008.08.001. Epub 2008 Oct 1.

PMID:
18786629
[PubMed - indexed for MEDLINE]
Free Article
10.

Bottlenecks and hubs in inferred networks are important for virulence in Salmonella typhimurium.

McDermott JE, Taylor RC, Yoon H, Heffron F.

J Comput Biol. 2009 Feb;16(2):169-80. doi: 10.1089/cmb.2008.04TT.

PMID:
19178137
[PubMed - indexed for MEDLINE]
11.

An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer.

Xu M, Kao MC, Nunez-Iglesias J, Nevins JR, West M, Zhou XJ.

BMC Genomics. 2008;9 Suppl 1:S12. doi: 10.1186/1471-2164-9-S1-S12.

PMID:
18366601
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Transcriptional regulatory network analysis during epithelial-mesenchymal transformation of retinal pigment epithelium.

Pratt CH, Vadigepalli R, Chakravarthula P, Gonye GE, Philp NJ, Grunwald GB.

Mol Vis. 2008 Aug 4;14:1414-28.

PMID:
18682805
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

A predictive model of the oxygen and heme regulatory network in yeast.

Kundaje A, Xin X, Lan C, Lianoglou S, Zhou M, Zhang L, Leslie C.

PLoS Comput Biol. 2008 Nov;4(11):e1000224. doi: 10.1371/journal.pcbi.1000224. Epub 2008 Nov 14.

PMID:
19008939
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Role of duplicate genes in robustness against deleterious human mutations.

Hsiao TL, Vitkup D.

PLoS Genet. 2008 Mar 14;4(3):e1000014. doi: 10.1371/journal.pgen.1000014.

PMID:
18369440
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

A comprehensive functional analysis of tissue specificity of human gene expression.

Dezso Z, Nikolsky Y, Sviridov E, Shi W, Serebriyskaya T, Dosymbekov D, Bugrim A, Rakhmatulin E, Brennan RJ, Guryanov A, Li K, Blake J, Samaha RR, Nikolskaya T.

BMC Biol. 2008 Nov 12;6:49. doi: 10.1186/1741-7007-6-49.

PMID:
19014478
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Network motif-based identification of transcription factor-target gene relationships by integrating multi-source biological data.

Zhang Y, Xuan J, de los Reyes BG, Clarke R, Ressom HW.

BMC Bioinformatics. 2008 Apr 21;9:203. doi: 10.1186/1471-2105-9-203.

PMID:
18426580
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Heterozygosity: an expanding role in proteomics.

Vladutiu GD.

Mol Genet Metab. 2001 Sep-Oct;74(1-2):51-63. Review.

PMID:
11592803
[PubMed - indexed for MEDLINE]
18.

Disease phenocode analysis identifies SNP-guided microRNA maps (MirMaps) associated with human "master" disease genes.

Glinsky GV.

Cell Cycle. 2008 Dec;7(23):3680-94. Epub 2008 Dec 6.

PMID:
19029827
[PubMed - indexed for MEDLINE]
Free Article
19.

Prediction of human disease genes by human-mouse conserved coexpression analysis.

Ala U, Piro RM, Grassi E, Damasco C, Silengo L, Oti M, Provero P, Di Cunto F.

PLoS Comput Biol. 2008 Mar 28;4(3):e1000043. doi: 10.1371/journal.pcbi.1000043.

PMID:
18369433
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Novel functional view of the crocidolite asbestos-treated A549 human lung epithelial transcriptome reveals an intricate network of pathways with opposing functions.

Hevel JM, Olson-Buelow LC, Ganesan B, Stevens JR, Hardman JP, Aust AE.

BMC Genomics. 2008 Aug 7;9:376. doi: 10.1186/1471-2164-9-376.

PMID:
18687144
[PubMed - indexed for MEDLINE]
Free PMC Article

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