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Related Citations for PubMed (Select 18065488)


Analysis of nuclear receptor pseudogenes in vertebrates: how the silent tell their stories.

Zhang ZD, Cayting P, Weinstock G, Gerstein M.

Mol Biol Evol. 2008 Jan;25(1):131-43. Epub 2007 Dec 7.


Comprehensive analysis of the pseudogenes of glycolytic enzymes in vertebrates: the anomalously high number of GAPDH pseudogenes highlights a recent burst of retrotrans-positional activity.

Liu YJ, Zheng D, Balasubramanian S, Carriero N, Khurana E, Robilotto R, Gerstein MB.

BMC Genomics. 2009 Oct 16;10:480. doi: 10.1186/1471-2164-10-480.


Comparison of complete nuclear receptor sets from the human, Caenorhabditis elegans and Drosophila genomes.

Maglich JM, Sluder A, Guan X, Shi Y, McKee DD, Carrick K, Kamdar K, Willson TM, Moore JT.

Genome Biol. 2001;2(8):RESEARCH0029. Epub 2001 Jul 24.


Molecular fossils in the human genome: identification and analysis of the pseudogenes in chromosomes 21 and 22.

Harrison PM, Hegyi H, Balasubramanian S, Luscombe NM, Bertone P, Echols N, Johnson T, Gerstein M.

Genome Res. 2002 Feb;12(2):272-80.


The human ABC transporter pseudogene family: Evidence for transcription and gene-pseudogene interference.

Piehler AP, Hellum M, Wenzel JJ, Kaminski E, Haug KB, Kierulf P, Kaminski WE.

BMC Genomics. 2008 Apr 11;9:165. doi: 10.1186/1471-2164-9-165.


New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes.

Panopoulou G, Hennig S, Groth D, Krause A, Poustka AJ, Herwig R, Vingron M, Lehrach H.

Genome Res. 2003 Jun;13(6A):1056-66.


Identification and analysis of over 2000 ribosomal protein pseudogenes in the human genome.

Zhang Z, Harrison P, Gerstein M.

Genome Res. 2002 Oct;12(10):1466-82.


Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates.

Zhang ZD, Frankish A, Hunt T, Harrow J, Gerstein M.

Genome Biol. 2010;11(3):R26. doi: 10.1186/gb-2010-11-3-r26. Epub 2010 Mar 8.


Studying genomes through the aeons: protein families, pseudogenes and proteome evolution.

Harrison PM, Gerstein M.

J Mol Biol. 2002 May 17;318(5):1155-74. Review.


Evolutionary dynamics of the interferon-induced transmembrane gene family in vertebrates.

Zhang Z, Liu J, Li M, Yang H, Zhang C.

PLoS One. 2012;7(11):e49265. doi: 10.1371/journal.pone.0049265. Epub 2012 Nov 15.


Segmental duplications in the human genome reveal details of pseudogene formation.

Khurana E, Lam HY, Cheng C, Carriero N, Cayting P, Gerstein MB.

Nucleic Acids Res. 2010 Nov;38(20):6997-7007. doi: 10.1093/nar/gkq587. Epub 2010 Jul 8.


Whole genome duplications and expansion of the vertebrate GATA transcription factor gene family.

Gillis WQ, St John J, Bowerman B, Schneider SQ.

BMC Evol Biol. 2009 Aug 20;9:207. doi: 10.1186/1471-2148-9-207.


Schistosoma mansoni (Platyhelminthes, Trematoda) nuclear receptors: sixteen new members and a novel subfamily.

Wu W, Niles EG, El-Sayed N, Berriman M, LoVerde PT.

Gene. 2006 Feb 1;366(2):303-15. Epub 2006 Jan 6.


The vertebrate makorin ubiquitin ligase gene family has been shaped by large-scale duplication and retroposition from an ancestral gonad-specific, maternal-effect gene.

Böhne A, Darras A, D'Cotta H, Baroiller JF, Galiana-Arnoux D, Volff JN.

BMC Genomics. 2010 Dec 20;11:721. doi: 10.1186/1471-2164-11-721.


Frequent emergence and functional resurrection of processed pseudogenes in the human and mouse genomes.

Sakai H, Koyanagi KO, Imanishi T, Itoh T, Gojobori T.

Gene. 2007 Mar 15;389(2):196-203. Epub 2006 Nov 18.


Chromosomal evolution of the PKD1 gene family in primates.

Kirsch S, Pasantes J, Wolf A, Bogdanova N, Münch C, Markoff A, Pennekamp P, Krawczak M, Dworniczak B, Schempp W.

BMC Evol Biol. 2008 Sep 26;8:263. doi: 10.1186/1471-2148-8-263. Erratum in: BMC Evol Biol. 2009;9:14.. Markoff; Arseni [added].

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