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Results: 1 to 20 of 370

Similar articles for PubMed (Select 18027282)

1.

Delimiting species without monophyletic gene trees.

Knowles LL, Carstens BC.

Syst Biol. 2007 Dec;56(6):887-95.

PMID:
18027282
2.

Genetic and ecological data reveal species boundaries between viviparous and oviparous lizard lineages.

Cornetti L, Ficetola GF, Hoban S, Vernesi C.

Heredity (Edinb). 2015 Jul 1. doi: 10.1038/hdy.2015.54. [Epub ahead of print]

PMID:
26126542
3.

Concordant species delimitation from multiple independent evidence: A case study with the Pachytriton brevipes complex (Caudata: Salamandridae).

Wu Y, Murphy RW.

Mol Phylogenet Evol. 2015 Jun 25. pii: S1055-7903(15)00180-3. doi: 10.1016/j.ympev.2015.06.010. [Epub ahead of print]

PMID:
26119130
4.

Weighted Statistical Binning: Enabling Statistically Consistent Genome-Scale Phylogenetic Analyses.

Bayzid MS, Mirarab S, Boussau B, Warnow T.

PLoS One. 2015 Jun 18;10(6):e0129183. doi: 10.1371/journal.pone.0129183. eCollection 2015.

5.

ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes.

Mirarab S, Warnow T.

Bioinformatics. 2015 Jun 15;31(12):i44-i52. doi: 10.1093/bioinformatics/btv234.

6.

Origin and speciation of Picea schrenkiana and Picea smithiana in the Center Asian Highlands and Himalayas.

Li L, Sun Y, Zou J, Yue W, Wang X, Liu J.

Plant Mol Biol Report. 2015;33(3):661-672.

7.

Similarity thresholds used in DNA sequence assembly from short reads can reduce the comparability of population histories across species.

Harvey MG, Judy CD, Seeholzer GF, Maley JM, Graves GR, Brumfield RT.

PeerJ. 2015 Apr 21;3:e895. doi: 10.7717/peerj.895. eCollection 2015.

8.

Concatenation and Species Tree Methods Exhibit Statistically Indistinguishable Accuracy under a Range of Simulated Conditions.

Tonini J, Moore A, Stern D, Shcheglovitova M, Ortí G.

PLoS Curr. 2015 Mar 9;7. pii: ecurrents.tol.34260cc27551a527b124ec5f6334b6be. doi: 10.1371/currents.tol.34260cc27551a527b124ec5f6334b6be.

9.

Assessing species boundaries using multilocus species delimitation in a morphologically conserved group of neotropical freshwater fishes, the Poecilia sphenops species complex (Poeciliidae).

Bagley JC, Alda F, Breitman MF, Bermingham E, van den Berghe EP, Johnson JB.

PLoS One. 2015 Apr 7;10(4):e0121139. doi: 10.1371/journal.pone.0121139. eCollection 2015.

10.

Effects of phylogenetic reconstruction method on the robustness of species delimitation using single-locus data.

Tang CQ, Humphreys AM, Fontaneto D, Barraclough TG, Paradis E.

Methods Ecol Evol. 2014 Oct;5(10):1086-1094. Epub 2014 Oct 29.

11.

On the Robustness to Gene Tree Estimation Error (or lack thereof) of Coalescent-Based Species Tree Methods.

Roch S, Warnow T.

Syst Biol. 2015 Jul;64(4):663-76. doi: 10.1093/sysbio/syv016. Epub 2015 Mar 25.

PMID:
25813358
12.

Assignment of homoeologs to parental genomes in allopolyploids for species tree inference, with an example from Fumaria (papaveraceae).

Bertrand YJ, Scheen AC, Marcussen T, Pfeil BE, de Sousa F, Oxelman B.

Syst Biol. 2015 May;64(3):448-71. doi: 10.1093/sysbio/syv004. Epub 2015 Jan 20.

PMID:
25604357
13.

Delimiting Species-Poor Data Sets using Single Molecular Markers: A Study of Barcode Gaps, Haplowebs and GMYC.

Dellicour S, Flot JF.

Syst Biol. 2015 Jan 19. pii: syu130. [Epub ahead of print]

PMID:
25601944
14.

Age-dependent speciation can explain the shape of empirical phylogenies.

Hagen O, Hartmann K, Steel M, Stadler T.

Syst Biol. 2015 May;64(3):432-40. doi: 10.1093/sysbio/syv001. Epub 2015 Jan 8.

15.

Lineage delimitation and description of nine new species of bush frogs (Anura: Raorchestes, Rhacophoridae) from the Western Ghats Escarpment.

Vijayakumar SP, Dinesh KP, Prabhu MV, Shanker K.

Zootaxa. 2014 Dec 10;3893(4):451-88. doi: 10.11646/zootaxa.3893.4.1.

PMID:
25544534
16.

Species are hypotheses: avoid connectivity assessments based on pillars of sand.

Pante E, Puillandre N, Viricel A, Arnaud-Haond S, Aurelle D, Castelin M, Chenuil A, Destombe C, Forcioli D, Valero M, Viard F, Samadi S.

Mol Ecol. 2015 Feb;24(3):525-44. doi: 10.1111/mec.13048. Epub 2015 Jan 19.

PMID:
25529046
17.

Can one hear the shape of a population history?

Kim J, Mossel E, Rácz MZ, Ross N.

Theor Popul Biol. 2014 Dec 11;100C:26-38. doi: 10.1016/j.tpb.2014.12.002. [Epub ahead of print]

PMID:
25498195
18.

Bayesian species delimitation combining multiple genes and traits in a unified framework.

Solís-Lemus C, Knowles LL, Ané C.

Evolution. 2015 Feb;69(2):492-507. doi: 10.1111/evo.12582. Epub 2015 Jan 16.

PMID:
25495061
19.

Species delimitation in the lichenized fungal genus Vulpicida (Parmeliaceae, Ascomycota) using gene concatenation and coalescent-based species tree approaches.

Saag L, Mark K, Saag A, Randlane T.

Am J Bot. 2014 Dec;101(12):2169-82. doi: 10.3732/ajb.1400439. Epub 2014 Dec 3.

PMID:
25480713
20.

Applying species-tree analyses to deep phylogenetic histories: challenges and potential suggested from a survey of empirical phylogenetic studies.

Lanier HC, Knowles LL.

Mol Phylogenet Evol. 2015 Feb;83:191-9. doi: 10.1016/j.ympev.2014.10.022. Epub 2014 Nov 4.

PMID:
25450097
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