Similar articles for PMID: 17953748

Year	Number of Results
2000	1
2002	3
2003	3
2004	9
2005	21
2006	14
2007	21
2008	18
2009	1
2010	1
2011	5
2012	1
2013	3
2014	3
2015	3
2016	1
2017	3
2021	1
2024	0

1

AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa.

Stamatakis A, Auch AF, Meier-Kolthoff J, Göker M. Stamatakis A, et al. BMC Bioinformatics. 2007 Oct 22;8:405. doi: 10.1186/1471-2105-8-405. BMC Bioinformatics. 2007. PMID: 17953748 Free PMC article.

2

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.

Stamatakis A. Stamatakis A. Bioinformatics. 2006 Nov 1;22(21):2688-90. doi: 10.1093/bioinformatics/btl446. Epub 2006 Aug 23. Bioinformatics. 2006. PMID: 16928733

3

DupTree: a program for large-scale phylogenetic analyses using gene tree parsimony.

Wehe A, Bansal MS, Burleigh JG, Eulenstein O. Wehe A, et al. Bioinformatics. 2008 Jul 1;24(13):1540-1. doi: 10.1093/bioinformatics/btn230. Epub 2008 May 12. Bioinformatics. 2008. PMID: 18474508

4

COPYCAT: cophylogenetic analysis tool.

Meier-Kolthoff JP, Auch AF, Huson DH, Göker M. Meier-Kolthoff JP, et al. Bioinformatics. 2007 Apr 1;23(7):898-900. doi: 10.1093/bioinformatics/btm027. Epub 2007 Jan 31. Bioinformatics. 2007. PMID: 17267434

5

Getting a tree fast: Neighbor Joining, FastME, and distance-based methods.

Desper R, Gascuel O. Desper R, et al. Curr Protoc Bioinformatics. 2006 Oct;Chapter 6:Unit 6.3. doi: 10.1002/0471250953.bi0603s15. Curr Protoc Bioinformatics. 2006. PMID: 18428768

6

GARD: a genetic algorithm for recombination detection.

Kosakovsky Pond SL, Posada D, Gravenor MB, Woelk CH, Frost SD. Kosakovsky Pond SL, et al. Bioinformatics. 2006 Dec 15;22(24):3096-8. doi: 10.1093/bioinformatics/btl474. Epub 2006 Nov 16. Bioinformatics. 2006. PMID: 17110367

7

DPRml: distributed phylogeny reconstruction by maximum likelihood.

Keane TM, Naughton TJ, Travers SA, McInerney JO, McCormack GP. Keane TM, et al. Bioinformatics. 2005 Apr 1;21(7):969-74. doi: 10.1093/bioinformatics/bti100. Epub 2004 Oct 28. Bioinformatics. 2005. PMID: 15513992

8

Representation in stochastic search for phylogenetic tree reconstruction.

Weber G, Ohno-Machado L, Shieber S. Weber G, et al. J Biomed Inform. 2006 Feb;39(1):43-50. doi: 10.1016/j.jbi.2005.11.001. Epub 2005 Nov 28. J Biomed Inform. 2006. PMID: 16359929 Free article.

9

GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A. Beisvag V, et al. BMC Bioinformatics. 2006 Oct 24;7:470. doi: 10.1186/1471-2105-7-470. BMC Bioinformatics. 2006. PMID: 17062145 Free PMC article.

10

Reconstructing phylogeny by quadratically approximated maximum likelihood.

Woodhams MD, Hendy MD. Woodhams MD, et al. Bioinformatics. 2004 Aug 4;20 Suppl 1:i348-54. doi: 10.1093/bioinformatics/bth926. Bioinformatics. 2004. PMID: 15262819

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