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Items: 1 to 20 of 95

1.

Abundance and functional diversity of riboswitches in microbial communities.

Kazanov MD, Vitreschak AG, Gelfand MS.

BMC Genomics. 2007 Oct 1;8:347.

2.

New RNA motifs suggest an expanded scope for riboswitches in bacterial genetic control.

Barrick JE, Corbino KA, Winkler WC, Nahvi A, Mandal M, Collins J, Lee M, Roth A, Sudarsan N, Jona I, Wickiser JK, Breaker RR.

Proc Natl Acad Sci U S A. 2004 Apr 27;101(17):6421-6. Epub 2004 Apr 19.

3.

Evidence for a second class of S-adenosylmethionine riboswitches and other regulatory RNA motifs in alpha-proteobacteria.

Corbino KA, Barrick JE, Lim J, Welz R, Tucker BJ, Puskarz I, Mandal M, Rudnick ND, Breaker RR.

Genome Biol. 2005;6(8):R70. Epub 2005 Aug 1.

4.

Computational identification of riboswitches based on RNA conserved functional sequences and conformations.

Chang TH, Huang HD, Wu LC, Yeh CT, Liu BJ, Horng JT.

RNA. 2009 Jul;15(7):1426-30. doi: 10.1261/rna.1623809. Epub 2009 May 21.

5.

Riboswitches in unexpected places--a synthetic riboswitch in a protein coding region.

Topp S, Gallivan JP.

RNA. 2008 Dec;14(12):2498-503. doi: 10.1261/rna.1269008. Epub 2008 Oct 22.

6.

RibEx: a web server for locating riboswitches and other conserved bacterial regulatory elements.

Abreu-Goodger C, Merino E.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W690-2.

7.

Mix-and-match riboswitches.

Stoddard CD, Batey RT.

ACS Chem Biol. 2006 Dec 15;1(12):751-4.

PMID:
17240972
8.

Determination of riboswitch structures: light at the end of the tunnel?

Serganov A.

RNA Biol. 2010 Jan-Feb;7(1):98-103. Epub 2010 Jan 25. Review.

PMID:
20061809
9.

Coenzyme B12 riboswitches are widespread genetic control elements in prokaryotes.

Nahvi A, Barrick JE, Breaker RR.

Nucleic Acids Res. 2004 Jan 2;32(1):143-50. Print 2004.

10.

Challenges of ligand identification for riboswitch candidates.

Meyer MM, Hammond MC, Salinas Y, Roth A, Sudarsan N, Breaker RR.

RNA Biol. 2011 Jan-Feb;8(1):5-10. Epub 2011 Jan 1.

11.

Regulation of lysine biosynthesis and transport genes in bacteria: yet another RNA riboswitch?

Rodionov DA, Vitreschak AG, Mironov AA, Gelfand MS.

Nucleic Acids Res. 2003 Dec 1;31(23):6748-57.

12.

Predicting riboswitch regulation on a genomic scale.

Barrick JE.

Methods Mol Biol. 2009;540:1-13. doi: 10.1007/978-1-59745-558-9_1.

PMID:
19381548
13.
14.

The corrin moiety of coenzyme B12 is the determinant for switching the btuB riboswitch of E. coli.

Gallo S, Oberhuber M, Sigel RK, Kräutler B.

Chembiochem. 2008 Jun 16;9(9):1408-14. doi: 10.1002/cbic.200800099.

PMID:
18506875
15.

Mn(2+)-sensing mechanisms of yybP-ykoY orphan riboswitches.

Price IR, Gaballa A, Ding F, Helmann JD, Ke A.

Mol Cell. 2015 Mar 19;57(6):1110-23. doi: 10.1016/j.molcel.2015.02.016.

16.

The ubiquitous yybP-ykoY riboswitch is a manganese-responsive regulatory element.

Dambach M, Sandoval M, Updegrove TB, Anantharaman V, Aravind L, Waters LS, Storz G.

Mol Cell. 2015 Mar 19;57(6):1099-109. doi: 10.1016/j.molcel.2015.01.035.

17.

Antibacterial lysine analogs that target lysine riboswitches.

Blount KF, Wang JX, Lim J, Sudarsan N, Breaker RR.

Nat Chem Biol. 2007 Jan;3(1):44-9. Epub 2006 Dec 3.

PMID:
17143270
18.

Magnesium-sensing riboswitches in bacteria.

Ramesh A, Winkler WC.

RNA Biol. 2010 Jan-Feb;7(1):77-83. Epub 2010 Jan 1.

PMID:
20023416
19.

Riboswitch-mediated control of gene expression in eukaryotes.

Wachter A.

RNA Biol. 2010 Jan-Feb;7(1):67-76. Epub 2010 Jan 1. Review.

PMID:
20009507
20.

Two glycine riboswitches activate the glycine cleavage system essential for glycine detoxification in Streptomyces griseus.

Tezuka T, Ohnishi Y.

J Bacteriol. 2014 Apr;196(7):1369-76. doi: 10.1128/JB.01480-13. Epub 2014 Jan 17.

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