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Results: 1 to 20 of 277

Similar articles for PubMed (Select 17581117)

1.

Genomic analysis of protein-DNA interactions in bacteria: insights into transcription and chromosome organization.

Wade JT, Struhl K, Busby SJ, Grainger DC.

Mol Microbiol. 2007 Jul;65(1):21-6. Review.

PMID:
17581117
2.

Mapping the distribution of chromatin proteins by ChIP on chip.

Nègre N, Lavrov S, Hennetin J, Bellis M, Cavalli G.

Methods Enzymol. 2006;410:316-41. Review.

PMID:
16938558
3.
4.

Dissecting regulatory networks in host-pathogen interaction using chIP-on-chip technology.

Sala C, Grainger DC, Cole ST.

Cell Host Microbe. 2009 May 8;5(5):430-7. doi: 10.1016/j.chom.2009.04.007. Review.

5.

Chop it, ChIP it, check it: the current status of chromatin immunoprecipitation.

Collas P, Dahl JA.

Front Biosci. 2008 Jan 1;13:929-43. Review.

PMID:
17981601
6.

Genome-wide analysis of histone modifications by ChIP-on-chip.

Huebert DJ, Kamal M, O'Donovan A, Bernstein BE.

Methods. 2006 Dec;40(4):365-9.

PMID:
17101450
7.

ChIP-chip for genome-wide analysis of protein binding in mammalian cells.

Kim TH, Barrera LO, Ren B.

Curr Protoc Mol Biol. 2007 Jul;Chapter 21:Unit 21.13. doi: 10.1002/0471142727.mb2113s79.

PMID:
18265397
8.

Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification.

van Bakel H, van Werven FJ, Radonjic M, Brok MO, van Leenen D, Holstege FC, Timmers HT.

Nucleic Acids Res. 2008 Mar;36(4):e21. doi: 10.1093/nar/gkm1144. Epub 2008 Jan 7.

9.

ChIP-chip comes of age for genome-wide functional analysis.

Wu J, Smith LT, Plass C, Huang TH.

Cancer Res. 2006 Jul 15;66(14):6899-902. Review.

10.

rMAT--an R/Bioconductor package for analyzing ChIP-chip experiments.

Droit A, Cheung C, Gottardo R.

Bioinformatics. 2010 Mar 1;26(5):678-9. doi: 10.1093/bioinformatics/btq023. Epub 2010 Jan 19.

11.

Defining in vivo targets of nuclear proteins by chromatin immunoprecipitation and microarray analysis.

Moqtaderi Z, Struhl K.

Curr Protoc Mol Biol. 2004 Nov;Chapter 21:Unit 21.9. doi: 10.1002/0471142727.mb2109s68.

PMID:
18265347
12.

Genomic studies of transcription factor-DNA interactions.

Sikder D, Kodadek T.

Curr Opin Chem Biol. 2005 Feb;9(1):38-45. Review.

PMID:
15701451
13.

ChIP-chip: data, model, and analysis.

Zheng M, Barrera LO, Ren B, Wu YN.

Biometrics. 2007 Sep;63(3):787-96.

PMID:
17825010
14.

Escherichia coli histone-like protein H-NS preferentially binds to horizontally acquired DNA in association with RNA polymerase.

Oshima T, Ishikawa S, Kurokawa K, Aiba H, Ogasawara N.

DNA Res. 2006 Aug 31;13(4):141-53. Epub 2006 Oct 17.

15.

ChIP-on-chip analysis of DNA topoisomerases.

Bermejo R, Katou YM, Shirahige K, Foiani M.

Methods Mol Biol. 2009;582:103-18. doi: 10.1007/978-1-60761-340-4_9.

PMID:
19763945
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18.

[ChIP on chip for transcriptional regulatory network analysis].

Miura H, Tomaru Y.

Tanpakushitsu Kakusan Koso. 2004 Dec;49(17 Suppl):2710-6. Review. Japanese. No abstract available.

PMID:
15669244
19.

Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo.

Aparicio O, Geisberg JV, Struhl K.

Curr Protoc Cell Biol. 2004 Sep;Chapter 17:Unit 17.7. doi: 10.1002/0471143030.cb1707s23. Review.

PMID:
18228445
20.

Technical considerations in using DNA microarrays to define regulons.

Rhodius VA, Wade JT.

Methods. 2009 Jan;47(1):63-72. doi: 10.1016/j.ymeth.2008.10.017. Epub 2008 Oct 26.

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