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Items: 1 to 20 of 82

1.
2.

Robustness of compound Dirichlet priors for Bayesian inference of branch lengths.

Zhang C, Rannala B, Yang Z.

Syst Biol. 2012 Oct;61(5):779-84. Epub 2012 Feb 10.

PMID:
22328570
3.

Global relationships of Bemisia tabaci (Hemiptera: Aleyrodidae) revealed using Bayesian analysis of mitochondrial COI DNA sequences.

Boykin LM, Shatters RG Jr, Rosell RC, McKenzie CL, Bagnall RA, De Barro P, Frohlich DR.

Mol Phylogenet Evol. 2007 Sep;44(3):1306-19. Epub 2007 May 16.

PMID:
17627853
4.

Are unequal clade priors problematic for Bayesian phylogenetics?

Brandley MC, Leaché AD, Warren DL, McGuire JA.

Syst Biol. 2006 Feb;55(1):138-46; author reply 147-51. No abstract available.

PMID:
16507530
5.

Molecular phylogenetics of cixiid planthoppers (Hemiptera: Fulgoromorpha): new insights from combined analyses of mitochondrial and nuclear genes.

Ceotto P, Kergoat GJ, Rasplus JY, Bourgoin T.

Mol Phylogenet Evol. 2008 Aug;48(2):667-78. doi: 10.1016/j.ympev.2008.04.026. Epub 2008 Apr 26.

PMID:
18539050
6.
7.

Deflating trees: improving Bayesian branch-length estimates using informed priors.

Nelson BJ, Andersen JJ, Brown JM.

Syst Biol. 2015 May;64(3):441-7. doi: 10.1093/sysbio/syv003. Epub 2015 Jan 16.

PMID:
25595363
8.

Effects of branch length uncertainty on Bayesian posterior probabilities for phylogenetic hypotheses.

Kolaczkowski B, Thornton JW.

Mol Biol Evol. 2007 Sep;24(9):2108-18. Epub 2007 Jul 17.

9.

Bayesian estimation of the number of species using noninformative priors.

Barger K, Bunge J.

Biom J. 2008 Dec;50(6):1064-76. doi: 10.1002/bimj.200810445.

PMID:
19035547
10.

Steady Plio-Pleistocene diversification and a 2-million-year sympatry threshold in a New Zealand cicada radiation.

Marshall DC, Slon K, Cooley JR, Hill KB, Simon C.

Mol Phylogenet Evol. 2008 Sep;48(3):1054-66. doi: 10.1016/j.ympev.2008.05.007. Epub 2008 May 14.

PMID:
18590969
11.

Phylogeny of Triatoma sherlocki (Hemiptera: Reduviidae: Triatominae) inferred from two mitochondrial genes suggests its location within the Triatoma brasiliensis complex.

Mendonça VJ, da Silva MT, de Araújo RF, Júnior JM, Júnior MB, Almeida CE, Costa J, Graminha MA, Cicarelli RM, da Rosa JA.

Am J Trop Med Hyg. 2009 Nov;81(5):858-64. doi: 10.4269/ajtmh.2009.08-0664.

12.

18S rRNA hyper-elongation and the phylogeny of Euhemiptera (Insecta: Hemiptera).

Xie Q, Tian Y, Zheng L, Bu W.

Mol Phylogenet Evol. 2008 May;47(2):463-71. doi: 10.1016/j.ympev.2008.01.024. Epub 2008 Feb 2.

PMID:
18358745
13.

Mitochondrial sequence data and Dipsacales phylogeny: mixed models, partitioned Bayesian analyses, and model selection.

Winkworth RC, Bell CD, Donoghue MJ.

Mol Phylogenet Evol. 2008 Mar;46(3):830-43. doi: 10.1016/j.ympev.2007.11.021. Epub 2007 Dec 5.

PMID:
18255318
14.

Phylogenetic approaches for the analysis of mitochondrial genome sequence data in the Hymenoptera--a lineage with both rapidly and slowly evolving mitochondrial genomes.

Dowton M, Cameron SL, Austin AD, Whiting MF.

Mol Phylogenet Evol. 2009 Aug;52(2):512-9. doi: 10.1016/j.ympev.2009.04.001. Epub 2009 Apr 11.

PMID:
19364540
16.
17.

Molecular phylogeny of the assassin bugs (Hemiptera: Reduviidae), based on mitochondrial and nuclear ribosomal genes.

Weirauch C, Munro JB.

Mol Phylogenet Evol. 2009 Oct;53(1):287-99. doi: 10.1016/j.ympev.2009.05.039. Epub 2009 Jun 14.

PMID:
19531379
18.

Elevated substitution rate estimates from ancient DNA: model violation and bias of Bayesian methods.

Navascués M, Emerson BC.

Mol Ecol. 2009 Nov;18(21):4390-7. doi: 10.1111/j.1365-294X.2009.04333.x. Epub 2009 Sep 7.

PMID:
19735451
19.

Glacial refugia in a maritime temperate climate: cicada (Kikihia subalpina) mtDNA phylogeography in New Zealand.

Marshall DC, Hill KB, Fontaine KM, Buckley TR, Simon C.

Mol Ecol. 2009 May;18(9):1995-2009.

PMID:
19434813
20.

Bayesian estimation of post-Messinian divergence times in Balearic Island lizards.

Brown RP, Terrasa B, Pérez-Mellado V, Castro JA, Hoskisson PA, Picornell A, Ramon MM.

Mol Phylogenet Evol. 2008 Jul;48(1):350-8. doi: 10.1016/j.ympev.2008.04.013. Epub 2008 Apr 14.

PMID:
18501640
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