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Items: 1 to 20 of 1058

1.

Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.

Gardina PJ, Clark TA, Shimada B, Staples MK, Yang Q, Veitch J, Schweitzer A, Awad T, Sugnet C, Dee S, Davies C, Williams A, Turpaz Y.

BMC Genomics. 2006 Dec 27;7:325.

2.

A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.

Yoshida R, Numata K, Imoto S, Nagasaki M, Doi A, Ueno K, Miyano S.

Genome Inform. 2006;17(1):88-99.

PMID:
17503359
3.

Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.

Ha KCh, Coulombe-Huntington J, Majewski J.

BMC Genomics. 2009 Nov 12;10:519. doi: 10.1186/1471-2164-10-519.

4.

Alternative splicing in colon, bladder, and prostate cancer identified by exon array analysis.

Thorsen K, Sørensen KD, Brems-Eskildsen AS, Modin C, Gaustadnes M, Hein AM, Kruhøffer M, Laurberg S, Borre M, Wang K, Brunak S, Krainer AR, Tørring N, Dyrskjøt L, Andersen CL, Orntoft TF.

Mol Cell Proteomics. 2008 Jul;7(7):1214-24. doi: 10.1074/mcp.M700590-MCP200. Epub 2008 Mar 18.

5.

Cancer-associated splicing variants of the CDCA1 and MSMB genes expressed in cancer cell lines and surgically resected gastric cancer tissues.

Ohnuma S, Miura K, Horii A, Fujibuchi W, Kaneko N, Gotoh O, Nagasaki H, Mizoi T, Tsukamoto N, Kobayashi T, Kinouchi M, Okabe M, Sasaki H, Shiiba K, Miyagawa K, Sasaki I.

Surgery. 2009 Jan;145(1):57-68. doi: 10.1016/j.surg.2008.08.010. Epub 2008 Oct 8.

PMID:
19081476
6.

Exon-level transcriptome profiling in murine breast cancer reveals splicing changes specific to tumors with different metastatic abilities.

Bemmo A, Dias C, Rose AA, Russo C, Siegel P, Majewski J.

PLoS One. 2010 Aug 6;5(8):e11981. doi: 10.1371/journal.pone.0011981.

7.

Gene expression and isoform variation analysis using Affymetrix Exon Arrays.

Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.

BMC Genomics. 2008 Nov 7;9:529. doi: 10.1186/1471-2164-9-529. Erratum in: BMC Genomics. 2009 Mar 23;10. doi: 10.1186/1471-2164-10-121.

8.

Transcription and splicing regulation in human umbilical vein endothelial cells under hypoxic stress conditions by exon array.

Hang X, Li P, Li Z, Qu W, Yu Y, Li H, Shen Z, Zheng H, Gao Y, Wu Y, Deng M, Sun Z, Zhang C.

BMC Genomics. 2009 Mar 25;10:126. doi: 10.1186/1471-2164-10-126.

9.

Predicting splice variant from DNA chip expression data.

Hu GK, Madore SJ, Moldover B, Jatkoe T, Balaban D, Thomas J, Wang Y.

Genome Res. 2001 Jul;11(7):1237-45.

10.

Identification of differentially regulated splice variants and novel exons in glial brain tumors using exon expression arrays.

French PJ, Peeters J, Horsman S, Duijm E, Siccama I, van den Bent MJ, Luider TM, Kros JM, van der Spek P, Sillevis Smitt PA.

Cancer Res. 2007 Jun 15;67(12):5635-42.

12.

Detection of alternatively spliced transcripts in leukemia cell lines by minisequencing on microarrays.

Milani L, Fredriksson M, Syvänen AC.

Clin Chem. 2006 Feb;52(2):202-11. Epub 2005 Dec 29.

13.

Identifying differential exon splicing using linear models and correlation coefficients.

Shah SH, Pallas JA.

BMC Bioinformatics. 2009 Jan 20;10:26. doi: 10.1186/1471-2105-10-26.

14.

Expression of alternatively spliced estrogen receptor alpha mRNAs is increased in breast cancer tissues.

Poola I, Speirs V.

J Steroid Biochem Mol Biol. 2001 Nov;78(5):459-69.

PMID:
11738556
15.

Exon-based clustering of murine breast tumor transcriptomes reveals alternative exons whose expression is associated with metastasis.

Dutertre M, Lacroix-Triki M, Driouch K, de la Grange P, Gratadou L, Beck S, Millevoi S, Tazi J, Lidereau R, Vagner S, Auboeuf D.

Cancer Res. 2010 Feb 1;70(3):896-905. doi: 10.1158/0008-5472.CAN-09-2703. Epub 2010 Jan 26.

17.
18.

Differentially expressed alternatively spliced genes in malignant pleural mesothelioma identified using massively parallel transcriptome sequencing.

Dong L, Jensen RV, De Rienzo A, Gordon GJ, Xu Y, Sugarbaker DJ, Bueno R.

BMC Med Genet. 2009 Dec 31;10:149. doi: 10.1186/1471-2350-10-149.

19.

easyExon--a Java-based GUI tool for processing and visualization of Affymetrix exon array data.

Chang TY, Li YY, Jen CH, Yang TP, Lin CH, Hsu MT, Wang HW.

BMC Bioinformatics. 2008 Oct 14;9:432. doi: 10.1186/1471-2105-9-432.

20.

Identification of three mouse mu-opioid receptor (MOR) gene (Oprm1) splice variants containing a newly identified alternatively spliced exon.

Doyle GA, Rebecca Sheng X, Lin SS, Press DM, Grice DE, Buono RJ, Ferraro TN, Berrettini WH.

Gene. 2007 Feb 15;388(1-2):135-47. Epub 2006 Nov 1.

PMID:
17156941
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