Format
Items per page
Sort by

Send to:

Choose Destination

Links from PubMed

Items: 1 to 20 of 1144

1.

Dynamic variable selection in SNP genotype autocalling from APEX microarray data.

Podder M, Welch WJ, Zamar RH, Tebbutt SJ.

BMC Bioinformatics. 2006 Nov 30;7:521.

2.

Dynamic model based algorithms for screening and genotyping over 100 K SNPs on oligonucleotide microarrays.

Di X, Matsuzaki H, Webster TA, Hubbell E, Liu G, Dong S, Bartell D, Huang J, Chiles R, Yang G, Shen MM, Kulp D, Kennedy GC, Mei R, Jones KW, Cawley S.

Bioinformatics. 2005 May 1;21(9):1958-63. Epub 2005 Jan 18.

3.

SNiPer: improved SNP genotype calling for Affymetrix 10K GeneChip microarray data.

Huentelman MJ, Craig DW, Shieh AD, Corneveaux JJ, Hu-Lince D, Pearson JV, Stephan DA.

BMC Genomics. 2005 Oct 31;6:149.

4.

A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.

Xiao Y, Segal MR, Yang YH, Yeh RF.

Bioinformatics. 2007 Jun 15;23(12):1459-67. Epub 2007 Apr 25.

5.

SNiPer-HD: improved genotype calling accuracy by an expectation-maximization algorithm for high-density SNP arrays.

Hua J, Craig DW, Brun M, Webster J, Zismann V, Tembe W, Joshipura K, Huentelman MJ, Dougherty ER, Stephan DA.

Bioinformatics. 2007 Jan 1;23(1):57-63. Epub 2006 Oct 24.

6.

Microarray genotyping resource to determine population stratification in genetic association studies of complex disease.

Tebbutt SJ, He JQ, Burkett KM, Ruan J, Opushnyev IV, Tripp BW, Zeznik JA, Abara CO, Nelson CC, Walley KR.

Biotechniques. 2004 Dec;37(6):977-85.

PMID:
15597547
7.

Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples.

Hong H, Su Z, Ge W, Shi L, Perkins R, Fang H, Xu J, Chen JJ, Han T, Kaput J, Fuscoe JC, Tong W.

BMC Bioinformatics. 2008 Aug 12;9 Suppl 9:S17. doi: 10.1186/1471-2105-9-S9-S17.

8.

Accessing single nucleotide polymorphisms in genomic DNA by direct multiplex polymerase chain reaction amplification on oligonucleotide microarrays.

Huber M, Mündlein A, Dornstauder E, Schneeberger C, Tempfer CB, Mueller MW, Schmidt WM.

Anal Biochem. 2002 Apr 1;303(1):25-33.

PMID:
11906147
9.

Robust SNP genotyping by multiplex PCR and arrayed primer extension.

Podder M, Ruan J, Tripp BW, Chu ZE, Tebbutt SJ.

BMC Med Genomics. 2008 Jan 31;1:5. doi: 10.1186/1755-8794-1-5.

10.

Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.

Seo J, Bakay M, Chen YW, Hilmer S, Shneiderman B, Hoffman EP.

Bioinformatics. 2004 Nov 1;20(16):2534-44. Epub 2004 Apr 29.

11.

Primer design and marker clustering for multiplex SNP-IT primer extension genotyping assay using statistical modeling.

Yuryev A, Huang J, Scott KE, Kuebler J, Donaldson M, Phillips MS, Pohl M, Boyce-Jacino MT.

Bioinformatics. 2004 Dec 12;20(18):3526-32. Epub 2004 Jul 29.

12.

Genotyping of multiple single nucleotide polymorphisms with hyperbranched rolling circle amplification and microarray.

Li X, Luo J, Xiao P, Shi X, Tang C, Lu Z.

Clin Chim Acta. 2009 Jan;399(1-2):40-4. doi: 10.1016/j.cca.2008.08.012. Epub 2008 Aug 23.

PMID:
18775688
13.
14.

High-throughput SNP genotyping by SBE/SBH.

Măndoiu II, Prăjescu C.

IEEE Trans Nanobioscience. 2007 Mar;6(1):28-35.

PMID:
17393847
15.

SNP Chart: an integrated platform for visualization and interpretation of microarray genotyping data.

Tebbutt SJ, Opushnyev IV, Tripp BW, Kassamali AM, Alexander WL, Andersen MI.

Bioinformatics. 2005 Jan 1;21(1):124-7. Epub 2004 Aug 12.

16.

A microarray minisequencing system for pharmacogenetic profiling of antihypertensive drug response.

Liljedahl U, Karlsson J, Melhus H, Kurland L, Lindersson M, Kahan T, Nyström F, Lind L, Syvänen AC.

Pharmacogenetics. 2003 Jan;13(1):7-17.

PMID:
12544508
17.

Fluorescent microsphere-based readout technology for multiplexed human single nucleotide polymorphism analysis and bacterial identification.

Ye F, Li MS, Taylor JD, Nguyen Q, Colton HM, Casey WM, Wagner M, Weiner MP, Chen J.

Hum Mutat. 2001 Apr;17(4):305-16.

PMID:
11295829
18.

SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation.

Panitz F, Stengaard H, Hornshøj H, Gorodkin J, Hedegaard J, Cirera S, Thomsen B, Madsen LB, Høj A, Vingborg RK, Zahn B, Wang X, Wang X, Wernersson R, Jørgensen CB, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Brunak S, Fredholm M, Bendixen C.

Bioinformatics. 2007 Jul 1;23(13):i387-91.

19.

Informative SNP selection methods based on SNP prediction.

He J, Zelikovsky A.

IEEE Trans Nanobioscience. 2007 Mar;6(1):60-7.

PMID:
17393851
20.

BNTagger: improved tagging SNP selection using Bayesian networks.

Lee PH, Shatkay H.

Bioinformatics. 2006 Jul 15;22(14):e211-9.

Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

Write to the Help Desk