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Items: 1 to 20 of 285

1.

Synthesis of a non-cationic, water-soluble perylenetetracarboxylic diimide and its interactions with G-quadruplex-forming DNA.

Samudrala R, Zhang X, Wadkins RM, Mattern DL.

Bioorg Med Chem. 2007 Jan 1;15(1):186-93. Epub 2006 Oct 10.

PMID:
17079147
2.

The aggregation and G-quadruplex DNA selectivity of charged 3,4,9,10-perylenetetracarboxylic acid diimides.

Kern JT, Kerwin SM.

Bioorg Med Chem Lett. 2002 Dec 2;12(23):3395-8.

PMID:
12419369
3.

The relationship between ligand aggregation and G-quadruplex DNA selectivity in a series of 3,4,9,10-perylenetetracarboxylic acid diimides.

Kern JT, Thomas PW, Kerwin SM.

Biochemistry. 2002 Sep 24;41(38):11379-89. Erratum in: Biochemistry 2002 Oct 15;41(41):12568.

PMID:
12234180
4.

Evaluation of binding of perylene diimide and benzannulated perylene diimide ligands to DNA by electrospray ionization mass spectrometry.

Mazzitelli CL, Brodbelt JS, Kern JT, Rodriguez M, Kerwin SM.

J Am Soc Mass Spectrom. 2006 Apr;17(4):593-604. Epub 2006 Feb 28.

5.

Water soluble cationic perylene derivatives as possible telomerase inhibitors: the search for selective G-quadruplex targeting.

Micheli E, D'Ambrosio D, Franceschin M, Savino M.

Mini Rev Med Chem. 2009 Dec;9(14):1622-32. Review.

PMID:
20088777
6.

The number and distances of positive charges of polyamine side chains in a series of perylene diimides significantly influence their ability to induce G-quadruplex structures and inhibit human telomerase.

Franceschin M, Lombardo CM, Pascucci E, D'Ambrosio D, Micheli E, Bianco A, Ortaggi G, Savino M.

Bioorg Med Chem. 2008 Mar 1;16(5):2292-304. doi: 10.1016/j.bmc.2007.11.065. Epub 2007 Nov 29.

PMID:
18165014
8.

Perylene diimides with different side chains are selective in inducing different G-quadruplex DNA structures and in inhibiting telomerase.

Rossetti L, Franceschin M, Bianco A, Ortaggi G, Savino M.

Bioorg Med Chem Lett. 2002 Sep 16;12(18):2527-33.

PMID:
12182853
9.

Perylene diimide G-quadruplex DNA binding selectivity is mediated by ligand aggregation.

Kerwin SM, Chen G, Kern JT, Thomas PW.

Bioorg Med Chem Lett. 2002 Feb 11;12(3):447-50.

PMID:
11814817
10.

Structural basis for telomeric G-quadruplex targeting by naphthalene diimide ligands.

Collie GW, Promontorio R, Hampel SM, Micco M, Neidle S, Parkinson GN.

J Am Chem Soc. 2012 Feb 8;134(5):2723-31. doi: 10.1021/ja2102423. Epub 2012 Jan 31.

PMID:
22280460
11.

Perylene side chains modulate G-quadruplex conformation in biologically relevant DNA sequences.

Pivetta C, Lucatello L, Krapcho AP, Gatto B, Palumbo M, Sissi C.

Bioorg Med Chem. 2008 Oct 15;16(20):9331-9. doi: 10.1016/j.bmc.2008.08.068. Epub 2008 Aug 31.

PMID:
18819816
12.

Perylene ligand wrapping G-quadruplex DNA for label-free fluorescence potassium recognition.

Hu Y, Han D, Zhang Q, Wu T, Li F, Niu L.

Biosens Bioelectron. 2012 Oct-Dec;38(1):396-401. doi: 10.1016/j.bios.2012.06.042. Epub 2012 Jul 1.

PMID:
22794931
13.

Cleavage of telomeric G-quadruplex DNA with perylene-EDTA*Fe(II).

Tuntiwechapikul W, Salazar M.

Biochemistry. 2001 Nov 13;40(45):13652-8.

PMID:
11695914
14.

Highly efficient quenching of excimer fluorescence by perylene diimide in DNA.

Bouquin N, Malinovskii VL, Häner R.

Chem Commun (Camb). 2008 May 7;(17):1974-6. doi: 10.1039/b802193g. Epub 2008 Mar 28.

PMID:
18536792
15.

G-quadruplex DNA cleavage preference and identification of a perylene diimide G-quadruplex photocleavage agent using a rapid fluorescent assay.

Schoonover M, Kerwin SM.

Bioorg Med Chem. 2012 Dec 15;20(24):6904-18. doi: 10.1016/j.bmc.2012.10.017. Epub 2012 Oct 27.

PMID:
23159040
16.
17.

Investigation of quadruplex oligonucleotide-drug interactions by electrospray ionization mass spectrometry.

David WM, Brodbelt J, Kerwin SM, Thomas PW.

Anal Chem. 2002 May 1;74(9):2029-33.

PMID:
12033303
18.

Intramolecular and intermolecular guanine quadruplexes of DNA in aqueous salt and ethanol solutions.

Vorlícková M, Bednárová K, Kejnovská I, Kypr J.

Biopolymers. 2007 May;86(1):1-10.

PMID:
17211886
19.

Molecular crowding creates an essential environment for the formation of stable G-quadruplexes in long double-stranded DNA.

Zheng KW, Chen Z, Hao YH, Tan Z.

Nucleic Acids Res. 2010 Jan;38(1):327-38. doi: 10.1093/nar/gkp898. Epub 2009 Oct 25.

20.

G-quadruplex formation in human telomeric (TTAGGG)4 sequence with complementary strand in close vicinity under molecularly crowded condition.

Kan ZY, Lin Y, Wang F, Zhuang XY, Zhao Y, Pang DW, Hao YH, Tan Z.

Nucleic Acids Res. 2007;35(11):3646-53. Epub 2007 May 8.

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