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Results: 1 to 20 of 77

Related Citations for PubMed (Select 16990807)

1.

Minimizing the risk of reporting false positives in large-scale RNAi screens.

Echeverri CJ, Beachy PA, Baum B, Boutros M, Buchholz F, Chanda SK, Downward J, Ellenberg J, Fraser AG, Hacohen N, Hahn WC, Jackson AL, Kiger A, Linsley PS, Lum L, Ma Y, Mathey-Prévôt B, Root DE, Sabatini DM, Taipale J, Perrimon N, Bernards R.

Nat Methods. 2006 Oct;3(10):777-9.

PMID:
16990807
2.

An effective method for controlling false discovery and false nondiscovery rates in genome-scale RNAi screens.

Zhang XD.

J Biomol Screen. 2010 Oct;15(9):1116-22. doi: 10.1177/1087057110381783. Epub 2010 Sep 20.

PMID:
20855561
3.

Evidence of off-target effects associated with long dsRNAs in Drosophila melanogaster cell-based assays.

Kulkarni MM, Booker M, Silver SJ, Friedman A, Hong P, Perrimon N, Mathey-Prevot B.

Nat Methods. 2006 Oct;3(10):833-8.

PMID:
16964256
4.

The use of SSMD-based false discovery and false nondiscovery rates in genome-scale RNAi screens.

Zhang XD, Lacson R, Yang R, Marine SD, McCampbell A, Toolan DM, Hare TR, Kajdas J, Berger JP, Holder DJ, Heyse JF, Ferrer M.

J Biomol Screen. 2010 Oct;15(9):1123-31. doi: 10.1177/1087057110381919. Epub 2010 Sep 17.

PMID:
20852024
5.

A protein network-guided screen for cell cycle regulators in Drosophila.

Guest ST, Yu J, Liu D, Hines JA, Kashat MA, Finley RL Jr.

BMC Syst Biol. 2011 May 6;5:65. doi: 10.1186/1752-0509-5-65.

6.

Matter arising: off-targets and genome-scale RNAi screens in Drosophila.

Perrimon N, Mathey-Prevot B.

Fly (Austin). 2007 Jan-Feb;1(1):1-5.

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9.

Error rates and powers in genome-scale RNAi screens.

Zhang XD, Marine SD, Ferrer M.

J Biomol Screen. 2009 Mar;14(3):230-8. doi: 10.1177/1087057109331475. Epub 2009 Feb 11.

PMID:
19211781
10.

High-throughput screening by RNA interference: control of two distinct types of variance.

Stone DJ, Marine S, Majercak J, Ray WJ, Espeseth A, Simon A, Ferrer M.

Cell Cycle. 2007 Apr 15;6(8):898-901. Epub 2007 Apr 22.

11.

RNAi screening: new approaches, understandings, and organisms.

Mohr SE, Perrimon N.

Wiley Interdiscip Rev RNA. 2012 Mar-Apr;3(2):145-58. doi: 10.1002/wrna.110. Epub 2011 Sep 22. Review.

12.

A probability-based approach for the analysis of large-scale RNAi screens.

König R, Chiang CY, Tu BP, Yan SF, DeJesus PD, Romero A, Bergauer T, Orth A, Krueger U, Zhou Y, Chanda SK.

Nat Methods. 2007 Oct;4(10):847-9. Epub 2007 Sep 9.

PMID:
17828270
13.

RNA interference in mammals: behind the screen.

Campeau E, Gobeil S.

Brief Funct Genomics. 2011 Jul;10(4):215-26. doi: 10.1093/bfgp/elr018. Review.

PMID:
21791555
14.

A novel method for tissue-specific RNAi rescue in Drosophila.

Schulz JG, David G, Hassan BA.

Nucleic Acids Res. 2009 Jul;37(13):e93. doi: 10.1093/nar/gkp450. Epub 2009 May 29.

16.

Vector-based RNAi approaches for stable, inducible and genome-wide screens.

Fewell GD, Schmitt K.

Drug Discov Today. 2006 Nov;11(21-22):975-82. Epub 2006 Sep 26. Review.

PMID:
17055406
17.

False negative rates in Drosophila cell-based RNAi screens: a case study.

Booker M, Samsonova AA, Kwon Y, Flockhart I, Mohr SE, Perrimon N.

BMC Genomics. 2011 Jan 20;12:50. doi: 10.1186/1471-2164-12-50.

18.

How to reduce false positive results when undertaking in vitro genotoxicity testing and thus avoid unnecessary follow-up animal tests: Report of an ECVAM Workshop.

Kirkland D, Pfuhler S, Tweats D, Aardema M, Corvi R, Darroudi F, Elhajouji A, Glatt H, Hastwell P, Hayashi M, Kasper P, Kirchner S, Lynch A, Marzin D, Maurici D, Meunier JR, Müller L, Nohynek G, Parry J, Parry E, Thybaud V, Tice R, van Benthem J, Vanparys P, White P.

Mutat Res. 2007 Mar 30;628(1):31-55. Epub 2007 Jan 13.

PMID:
17293159
19.

Limited agreement of independent RNAi screens for virus-required host genes owes more to false-negative than false-positive factors.

Hao L, He Q, Wang Z, Craven M, Newton MA, Ahlquist P.

PLoS Comput Biol. 2013;9(9):e1003235. doi: 10.1371/journal.pcbi.1003235. Epub 2013 Sep 19.

20.
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