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Items: 1 to 20 of 94

1.
2.

FeatureExtract--extraction of sequence annotation made easy.

Wernersson R.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W567-9.

3.

Integrating protein annotation resources through the Distributed Annotation System.

Olason PI.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W468-70.

4.

OligoWiz 2.0--integrating sequence feature annotation into the design of microarray probes.

Wernersson R, Nielsen HB.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W611-5.

6.

ASD: a bioinformatics resource on alternative splicing.

Stamm S, Riethoven JJ, Le Texier V, Gopalakrishnan C, Kumanduri V, Tang Y, Barbosa-Morais NL, Thanaraj TA.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D46-55.

7.

TACT: Transcriptome Auto-annotation Conducting Tool of H-InvDB.

Yamasaki C, Kawashima H, Todokoro F, Imamizu Y, Ogawa M, Tanino M, Itoh T, Gojobori T, Imanishi T.

Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W345-9.

8.

OrfPredictor: predicting protein-coding regions in EST-derived sequences.

Min XJ, Butler G, Storms R, Tsang A.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W677-80.

9.

Amino acid translation program for full-length cDNA sequences with frameshift errors.

Fukunishi Y, Hayashizaki Y.

Physiol Genomics. 2001 Mar 8;5(2):81-7.

PMID:
11242592
10.

Ribosome stalling regulates IRES-mediated translation in eukaryotes, a parallel to prokaryotic attenuation.

Fernandez J, Yaman I, Huang C, Liu H, Lopez AB, Komar AA, Caprara MG, Merrick WC, Snider MD, Kaufman RJ, Lamers WH, Hatzoglou M.

Mol Cell. 2005 Feb 4;17(3):405-16.

13.

MetWAMer: eukaryotic translation initiation site prediction.

Sparks ME, Brendel V.

BMC Bioinformatics. 2008 Sep 18;9:381. doi: 10.1186/1471-2105-9-381.

14.

Analysis of full length ADAMTS6 transcript reveals alternative splicing and a role for the 5' untranslated region in translational control.

Bevitt DJ, Li Z, Lindrop JL, Barker MD, Clarke MP, McKie N.

Gene. 2005 Oct 10;359:99-110.

PMID:
16129570
15.

Nonsense mutations in close proximity to the initiation codon fail to trigger full nonsense-mediated mRNA decay.

Inácio A, Silva AL, Pinto J, Ji X, Morgado A, Almeida F, Faustino P, Lavinha J, Liebhaber SA, Romão L.

J Biol Chem. 2004 Jul 30;279(31):32170-80. Epub 2004 May 25.

16.

RFMapp: ribosome flow model application.

Zur H, Tuller T.

Bioinformatics. 2012 Jun 15;28(12):1663-4. doi: 10.1093/bioinformatics/bts185. Epub 2012 Apr 11.

17.

Excision of the first intron from the gonadotropin-releasing hormone (GnRH) transcript serves as a key regulatory step for GnRH biosynthesis.

Son GH, Jung H, Seong JY, Choe Y, Geum D, Kim K.

J Biol Chem. 2003 May 16;278(20):18037-44. Epub 2003 Mar 13.

18.
19.

Advances in the Exon-Intron Database (EID).

Shepelev V, Fedorov A.

Brief Bioinform. 2006 Jun;7(2):178-85. Epub 2006 Mar 9. Review.

20.

Transient idling of posttermination ribosomes ready to reinitiate protein synthesis.

Karamyshev AL, Karamysheva ZN, Yamami T, Ito K, Nakamura Y.

Biochimie. 2004 Dec;86(12):933-8.

PMID:
15667944
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