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Results: 1 to 20 of 77

1.

Is optimal gene order impossible?

Poyatos JF, Hurst LD.

Trends Genet. 2006 Aug;22(8):420-3. Epub 2006 Jun 27.

PMID:
16806566
[PubMed - indexed for MEDLINE]
2.

Evidence for co-evolution of gene order and recombination rate.

Pál C, Hurst LD.

Nat Genet. 2003 Mar;33(3):392-5. Epub 2003 Feb 10.

PMID:
12577060
[PubMed - indexed for MEDLINE]
3.

Examining emergence of functional gene clustering in a simulated evolution.

Yerushalmi U, Teicher M.

Bull Math Biol. 2007 Oct;69(7):2261-80. Epub 2007 Jun 7.

PMID:
17554587
[PubMed - indexed for MEDLINE]
4.

Clustering of tissue-specific genes underlies much of the similarity in rates of protein evolution of linked genes.

Williams EJ, Hurst LD.

J Mol Evol. 2002 Apr;54(4):511-8.

PMID:
11956689
[PubMed - indexed for MEDLINE]
5.

The determinants of gene order conservation in yeasts.

Poyatos JF, Hurst LD.

Genome Biol. 2007;8(11):R233.

PMID:
17983469
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Characterization of the gene conversions between the multigene family members of the yeast genome.

Drouin G.

J Mol Evol. 2002 Jul;55(1):14-23.

PMID:
12165839
[PubMed - indexed for MEDLINE]
7.

Evolutionary rates and centrality in the yeast gene regulatory network.

Jovelin R, Phillips PC.

Genome Biol. 2009;10(4):R35. doi: 10.1186/gb-2009-10-4-r35. Epub 2009 Apr 9.

PMID:
19358738
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Coexpression, coregulation, and cofunctionality of neighboring genes in eukaryotic genomes.

Michalak P.

Genomics. 2008 Mar;91(3):243-8. Epub 2007 Dec 21. Review.

PMID:
18082363
[PubMed - indexed for MEDLINE]
Free Article
9.

Natural selection promotes the conservation of linkage of co-expressed genes.

Hurst LD, Williams EJ, Pál C.

Trends Genet. 2002 Dec;18(12):604-6.

PMID:
12446137
[PubMed - indexed for MEDLINE]
10.

Persistence drives gene clustering in bacterial genomes.

Fang G, Rocha EP, Danchin A.

BMC Genomics. 2008 Jan 7;9:4. doi: 10.1186/1471-2164-9-4.

PMID:
18179692
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Dosage sensitivity and the evolution of gene families in yeast.

Papp B, Pál C, Hurst LD.

Nature. 2003 Jul 10;424(6945):194-7.

PMID:
12853957
[PubMed - indexed for MEDLINE]
12.

The role of mutational dynamics in genome shrinkage.

van Hoek MJ, Hogeweg P.

Mol Biol Evol. 2007 Nov;24(11):2485-94. Epub 2007 Sep 3.

PMID:
17768305
[PubMed - indexed for MEDLINE]
Free Article
13.

High frequency of microsatellites in S. cerevisiae meiotic recombination hotspots.

Bagshaw AT, Pitt JP, Gemmell NJ.

BMC Genomics. 2008 Jan 28;9:49. doi: 10.1186/1471-2164-9-49.

PMID:
18226240
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

How much expression divergence after yeast gene duplication could be explained by regulatory motif evolution?

Zhang Z, Gu J, Gu X.

Trends Genet. 2004 Sep;20(9):403-7.

PMID:
15313547
[PubMed - indexed for MEDLINE]
15.

Support for multiple classes of local expression clusters in Drosophila melanogaster, but no evidence for gene order conservation.

Weber CC, Hurst LD.

Genome Biol. 2011;12(3):R23. doi: 10.1186/gb-2011-12-3-r23. Epub 2011 Mar 17.

PMID:
21414197
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Retention of protein complex membership by ancient duplicated gene products in budding yeast.

Musso G, Zhang Z, Emili A.

Trends Genet. 2007 Jun;23(6):266-9. Epub 2007 Apr 10. Review.

PMID:
17428571
[PubMed - indexed for MEDLINE]
17.

Yeast genome evolution--the origin of the species.

Scannell DR, Butler G, Wolfe KH.

Yeast. 2007 Nov;24(11):929-42. Review.

PMID:
17621376
[PubMed - indexed for MEDLINE]
18.

Functional and evolutionary inference in gene networks: does topology matter?

Siegal ML, Promislow DE, Bergman A.

Genetica. 2007 Jan;129(1):83-103. Epub 2006 Aug 8.

PMID:
16897451
[PubMed - indexed for MEDLINE]
19.

Detecting biological associations between genes based on the theory of phase synchronization.

Kim CS, Riikonen P, Salakoski T.

Biosystems. 2008 May;92(2):99-113. doi: 10.1016/j.biosystems.2007.12.006. Epub 2008 Jan 11.

PMID:
18289772
[PubMed - indexed for MEDLINE]
20.

Studies on fungal Pumilio gene family through mining multiple genome-scale data sets.

Matsushima Y, Sugiura R, Kuno T.

Kobe J Med Sci. 2007;53(4):163-9.

PMID:
17932456
[PubMed - indexed for MEDLINE]
Free Article

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