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Similar articles for PubMed (Select 16803346)

1.

Freezing of random RNA.

Lässig M, Wiese KJ.

Phys Rev Lett. 2006 Jun 9;96(22):228101. Epub 2006 Jun 5.

PMID:
16803346
2.

Statistical mechanics of secondary structures formed by random RNA sequences.

Bundschuh R, Hwa T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Mar;65(3 Pt 1):031903. Epub 2002 Feb 11.

PMID:
11909105
3.

Systematic field theory of the RNA glass transition.

David F, Wiese KJ.

Phys Rev Lett. 2007 Mar 23;98(12):128102. Epub 2007 Mar 20.

PMID:
17501158
4.

Freezing transition of the random bond RNA model: Statistical properties of the pairing weights.

Monthus C, Garel T.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Mar;75(3 Pt 1):031103. Epub 2007 Mar 12.

PMID:
17500664
5.

Model for folding and aggregation in RNA secondary structures.

Guttal V, Bundschuh R.

Phys Rev Lett. 2006 Jan 13;96(1):018105. Epub 2006 Jan 12.

PMID:
16486525
6.

DNA unzipping phase diagram calculated via replica theory.

Roland CB, Hatch KA, Prentiss M, Shakhnovich EI.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 May;79(5 Pt 1):051923. Epub 2009 May 28.

PMID:
19518496
7.

Zero-temperature properties of RNA secondary structures.

Marinari E, Pagnani A, Ricci-Tersenghi F.

Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Apr;65(4 Pt 1):041919. Epub 2002 Apr 8.

PMID:
12005885
8.

Melting of branched RNA molecules.

Bundschuh R, Bruinsma R.

Phys Rev Lett. 2008 Apr 11;100(14):148101. Epub 2008 Apr 7.

PMID:
18518073
9.

RNA denaturation: excluded volume, pseudoknots, and transition scenarios.

Baiesi M, Orlandini E, Stella AL.

Phys Rev Lett. 2003 Nov 7;91(19):198102. Epub 2003 Nov 6.

PMID:
14611620
10.

Dependence of RNA secondary structure on the energy model.

Burghardt B, Hartmann AK.

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Feb;71(2 Pt 1):021913. Epub 2005 Feb 25.

PMID:
15783358
11.

Glassy transition in a disordered model for the RNA secondary structure.

Pagnani A, Parisi G, Ricci-Tersenghi F.

Phys Rev Lett. 2000 Feb 28;84(9):2026-9.

PMID:
11017687
12.

Topology of pseudoknotted homopolymers.

Vernizzi G, Ribeca P, Orland H, Zee A.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Mar;73(3 Pt 1):031902. Epub 2006 Mar 3.

PMID:
16605553
13.

Exact solution of a RNA-like polymer model on the Husimi lattice.

Zara RA, Pretti M.

J Chem Phys. 2007 Nov 14;127(18):184902.

PMID:
18020662
14.

Impact of loop statistics on the thermodynamics of RNA folding.

Einert TR, Näger P, Orland H, Netz RR.

Phys Rev Lett. 2008 Jul 25;101(4):048103. Epub 2008 Jul 24.

PMID:
18764368
15.

Investigation of the Bernoulli model for RNA secondary structures.

Nebel ME.

Bull Math Biol. 2004 Sep;66(5):925-64.

PMID:
15294413
16.

RNA folding in the presence of counterions.

Mamasakhlisov YSh, Hayryan S, Morozov VF, Hu CK.

Phys Rev E Stat Nonlin Soft Matter Phys. 2007 Jun;75(6 Pt 1):061907. Epub 2007 Jun 11.

PMID:
17677300
17.

A set of nearest neighbor parameters for predicting the enthalpy change of RNA secondary structure formation.

Lu ZJ, Turner DH, Mathews DH.

Nucleic Acids Res. 2006;34(17):4912-24. Epub 2006 Sep 18.

18.

Anomalous scaling in nanopore translocation of structured heteropolymers.

McCauley M, Forties R, Gerland U, Bundschuh R.

Phys Biol. 2009 May 1;6(3):036006. doi: 10.1088/1478-3975/6/3/036006.

PMID:
19411739
19.

Unified approach to partition functions of RNA secondary structures.

Bundschuh R.

J Math Biol. 2014 Nov;69(5):1129-50. doi: 10.1007/s00285-013-0737-8. Epub 2013 Nov 1.

PMID:
24177391
20.

RNA-like polymer model: exact calculation on the Bethe lattice.

Pretti M.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Nov;74(5 Pt 1):051803. Epub 2006 Nov 21.

PMID:
17279932
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