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Results: 1 to 20 of 294

Related Citations for PubMed (Select 16672260)

1.

Integrative Array Analyzer: a software package for analysis of cross-platform and cross-species microarray data.

Pan F, Kamath K, Zhang K, Pulapura S, Achar A, Nunez-Iglesias J, Huang Y, Yan X, Han J, Hu H, Xu M, Hu J, Zhou XJ.

Bioinformatics. 2006 Jul 1;22(13):1665-7. Epub 2006 May 3.

2.

WebArray: an online platform for microarray data analysis.

Xia X, McClelland M, Wang Y.

BMC Bioinformatics. 2005 Dec 21;6:306.

3.

WGCNA: an R package for weighted correlation network analysis.

Langfelder P, Horvath S.

BMC Bioinformatics. 2008 Dec 29;9:559. doi: 10.1186/1471-2105-9-559.

4.

Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'.

Kuhn A, Luthi-Carter R, Delorenzi M.

BMC Bioinformatics. 2008 Jan 17;9:26. doi: 10.1186/1471-2105-9-26.

5.

HDBStat!: a platform-independent software suite for statistical analysis of high dimensional biology data.

Trivedi P, Edwards JW, Wang J, Gadbury GL, Srinivasasainagendra V, Zakharkin SO, Kim K, Mehta T, Brand JP, Patki A, Page GP, Allison DB.

BMC Bioinformatics. 2005 Apr 6;6:86.

6.

RACE: Remote Analysis Computation for gene Expression data.

Psarros M, Heber S, Sick M, Thoppae G, Harshman K, Sick B.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W638-43.

7.

Bioinformatics analysis of microarray data.

Zhang Y, Szustakowski J, Schinke M.

Methods Mol Biol. 2009;573:259-84. doi: 10.1007/978-1-60761-247-6_15. Review.

PMID:
19763933
8.

CGHPRO -- a comprehensive data analysis tool for array CGH.

Chen W, Erdogan F, Ropers HH, Lenzner S, Ullmann R.

BMC Bioinformatics. 2005 Apr 5;6:85.

9.

PATIKAmad: putting microarray data into pathway context.

Babur O, Colak R, Demir E, Dogrusoz U.

Proteomics. 2008 Jun;8(11):2196-8. doi: 10.1002/pmic.200700769.

PMID:
18452226
10.

Visualization-based discovery and analysis of genomic aberrations in microarray data.

Myers CL, Chen X, Troyanskaya OG.

BMC Bioinformatics. 2005 Jun 13;6:146.

11.

DRAGON View: information visualization for annotated microarray data.

Bouton CM, Pevsner J.

Bioinformatics. 2002 Feb;18(2):323-4.

12.

Pre-processing of microarray data and analysis of differential expression.

Durinck S.

Methods Mol Biol. 2008;452:89-110. doi: 10.1007/978-1-60327-159-2_4. Review.

PMID:
18563370
13.

A web-based platform for rice microarray annotation and data analysis.

Chen D, Zhang F, Yuan C, Lu J, Li X, Chen M.

Sci China Life Sci. 2010 Dec;53(12):1467-73. doi: 10.1007/s11427-010-4101-6. Epub 2010 Dec 23.

PMID:
21181349
14.

ISACGH: a web-based environment for the analysis of Array CGH and gene expression which includes functional profiling.

Conde L, Montaner D, Burguet-Castell J, Tárraga J, Medina I, Al-Shahrour F, Dopazo J.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W81-5. Epub 2007 Apr 27.

15.

EzArray: a web-based highly automated Affymetrix expression array data management and analysis system.

Zhu Y, Zhu Y, Xu W.

BMC Bioinformatics. 2008 Jan 24;9:46. doi: 10.1186/1471-2105-9-46.

16.

Array2BIO: from microarray expression data to functional annotation of co-regulated genes.

Loots GG, Chain PS, Mabery S, Rasley A, Garcia E, Ovcharenko I.

BMC Bioinformatics. 2006 Jun 16;7:307.

17.

Gene Aging Nexus: a web database and data mining platform for microarray data on aging.

Pan F, Chiu CH, Pulapura S, Mehan MR, Nunez-Iglesias J, Zhang K, Kamath K, Waterman MS, Finch CE, Zhou XJ.

Nucleic Acids Res. 2007 Jan;35(Database issue):D756-9. Epub 2006 Nov 7.

18.

Gene ARMADA: an integrated multi-analysis platform for microarray data implemented in MATLAB.

Chatziioannou A, Moulos P, Kolisis FN.

BMC Bioinformatics. 2009 Oct 27;10:354. doi: 10.1186/1471-2105-10-354.

19.

Data storage and analysis in ArrayExpress and Expression Profiler.

Rustici G, Kapushesky M, Kolesnikov N, Parkinson H, Sarkans U, Brazma A.

Curr Protoc Bioinformatics. 2008 Sep;Chapter 7:Unit 7.13. doi: 10.1002/0471250953.bi0713s23.

PMID:
18819076
20.

Handling missing DNA microarray data by kriging estimators.

Pham TD.

Int J Bioinform Res Appl. 2006;2(2):177-92.

PMID:
18048161
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