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Comparative peptide binding studies of the PABC domains from the ubiquitin-protein isopeptide ligase HYD and poly(A)-binding protein. Implications for HYD function.

Lim NS, Kozlov G, Chang TC, Groover O, Siddiqui N, Volpon L, De Crescenzo G, Shyu AB, Gehring K.

J Biol Chem. 2006 May 19;281(20):14376-82. Epub 2006 Mar 22.


Molecular determinants of PAM2 recognition by the MLLE domain of poly(A)-binding protein.

Kozlov G, Ménade M, Rosenauer A, Nguyen L, Gehring K.

J Mol Biol. 2010 Mar 26;397(2):397-407. doi: 10.1016/j.jmb.2010.01.032. Epub 2010 Jan 22.


Solution structure of the orphan PABC domain from Saccharomyces cerevisiae poly(A)-binding protein.

Kozlov G, Siddiqui N, Coillet-Matillon S, Trempe JF, Ekiel I, Sprules T, Gehring K.

J Biol Chem. 2002 Jun 21;277(25):22822-8. Epub 2002 Apr 8.


Structural basis of ligand recognition by PABC, a highly specific peptide-binding domain found in poly(A)-binding protein and a HECT ubiquitin ligase.

Kozlov G, De Crescenzo G, Lim NS, Siddiqui N, Fantus D, Kahvejian A, Trempe JF, Elias D, Ekiel I, Sonenberg N, O'Connor-McCourt M, Gehring K.

EMBO J. 2004 Jan 28;23(2):272-81. Epub 2003 Dec 18.


Solution structure of the PABC domain from wheat poly (A)-binding protein: an insight into RNA metabolic and translational control in plants.

Siddiqui N, Osborne MJ, Gallie DR, Gehring K.

Biochemistry. 2007 Apr 10;46(14):4221-31. Epub 2007 Mar 15.


Solution structure of the C-terminal domain from poly(A)-binding protein in Trypanosoma cruzi: a vegetal PABC domain.

Siddiqui N, Kozlov G, D'Orso I, Trempe JF, Gehring K.

Protein Sci. 2003 Sep;12(9):1925-33.


Structure and function of the C-terminal PABC domain of human poly(A)-binding protein.

Kozlov G, Trempe JF, Khaleghpour K, Kahvejian A, Ekiel I, Gehring K.

Proc Natl Acad Sci U S A. 2001 Apr 10;98(8):4409-13. Epub 2001 Apr 3.


alpha4 phosphoprotein interacts with EDD E3 ubiquitin ligase and poly(A)-binding protein.

McDonald WJ, Sangster SM, Moffat LD, Henderson MJ, Too CK.

J Cell Biochem. 2010 Aug 1;110(5):1123-9. doi: 10.1002/jcb.22624.


Survey on the PABC recognition motif PAM2.

Albrecht M, Lengauer T.

Biochem Biophys Res Commun. 2004 Mar 26;316(1):129-38.


Structural basis of ubiquitin recognition by the ubiquitin-associated (UBA) domain of the ubiquitin ligase EDD.

Kozlov G, Nguyen L, Lin T, De Crescenzo G, Park M, Gehring K.

J Biol Chem. 2007 Dec 7;282(49):35787-95. Epub 2007 Sep 25.


Poly(A) nuclease interacts with the C-terminal domain of polyadenylate-binding protein domain from poly(A)-binding protein.

Siddiqui N, Mangus DA, Chang TC, Palermino JM, Shyu AB, Gehring K.

J Biol Chem. 2007 Aug 24;282(34):25067-75. Epub 2007 Jun 26.


Four distinct classes of proteins as interaction partners of the PABC domain of Arabidopsis thaliana Poly(A)-binding proteins.

Bravo J, Aguilar-Henonin L, Olmedo G, Guzmán P.

Mol Genet Genomics. 2005 Feb;272(6):651-65. Epub 2005 Jan 14.


Identification of a C-terminal poly(A)-binding protein (PABP)-PABP interaction domain: role in cooperative binding to poly (A) and efficient cap distal translational repression.

Melo EO, Dhalia R, Martins de Sa C, Standart N, de Melo Neto OP.

J Biol Chem. 2003 Nov 21;278(47):46357-68. Epub 2003 Sep 2.


Poly-ubiquitin binding by the polyglutamine disease protein ataxin-3 links its normal function to protein surveillance pathways.

Chai Y, Berke SS, Cohen RE, Paulson HL.

J Biol Chem. 2004 Jan 30;279(5):3605-11. Epub 2003 Nov 5.


Molecular interaction between Smurf1 WW2 domain and PPXY motifs of Smad1, Smad5, and Smad6--modeling and analysis.

Sangadala S, Metpally RP, Reddy BV.

J Biomol Struct Dyn. 2007 Aug;25(1):11-23.


Structural and functional characterization of the NHR1 domain of the Drosophila neuralized E3 ligase in the notch signaling pathway.

He F, Saito K, Kobayashi N, Harada T, Watanabe S, Kigawa T, Güntert P, Ohara O, Tanaka A, Unzai S, Muto Y, Yokoyama S.

J Mol Biol. 2009 Oct 23;393(2):478-95. doi: 10.1016/j.jmb.2009.08.020. Epub 2009 Aug 14.


X-ray structure of the human hyperplastic discs protein: an ortholog of the C-terminal domain of poly(A)-binding protein.

Deo RC, Sonenberg N, Burley SK.

Proc Natl Acad Sci U S A. 2001 Apr 10;98(8):4414-9. Epub 2001 Apr 3.


La-related protein 4 binds poly(A), interacts with the poly(A)-binding protein MLLE domain via a variant PAM2w motif, and can promote mRNA stability.

Yang R, Gaidamakov SA, Xie J, Lee J, Martino L, Kozlov G, Crawford AK, Russo AN, Conte MR, Gehring K, Maraia RJ.

Mol Cell Biol. 2011 Feb;31(3):542-56. doi: 10.1128/MCB.01162-10. Epub 2010 Nov 22.

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