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Results: 1 to 20 of 284

1.

Functional genomics of genes with small open reading frames (sORFs) in S. cerevisiae.

Kastenmayer JP, Ni L, Chu A, Kitchen LE, Au WC, Yang H, Carter CD, Wheeler D, Davis RW, Boeke JD, Snyder MA, Basrai MA.

Genome Res. 2006 Mar;16(3):365-73.

PMID:
16510898
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Functional profiling of the Saccharomyces cerevisiae genome.

Giaever G, Chu AM, Ni L, Connelly C, Riles L, Véronneau S, Dow S, Lucau-Danila A, Anderson K, André B, Arkin AP, Astromoff A, El-Bakkoury M, Bangham R, Benito R, Brachat S, Campanaro S, Curtiss M, Davis K, Deutschbauer A, Entian KD, Flaherty P, Foury F, Garfinkel DJ, Gerstein M, Gotte D, Güldener U, Hegemann JH, Hempel S, Herman Z, Jaramillo DF, Kelly DE, Kelly SL, Kötter P, LaBonte D, Lamb DC, Lan N, Liang H, Liao H, Liu L, Luo C, Lussier M, Mao R, Menard P, Ooi SL, Revuelta JL, Roberts CJ, Rose M, Ross-Macdonald P, Scherens B, Schimmack G, Shafer B, Shoemaker DD, Sookhai-Mahadeo S, Storms RK, Strathern JN, Valle G, Voet M, Volckaert G, Wang CY, Ward TR, Wilhelmy J, Winzeler EA, Yang Y, Yen G, Youngman E, Yu K, Bussey H, Boeke JD, Snyder M, Philippsen P, Davis RW, Johnston M.

Nature. 2002 Jul 25;418(6896):387-91.

PMID:
12140549
[PubMed - indexed for MEDLINE]
3.

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis.

Winzeler EA, Shoemaker DD, Astromoff A, Liang H, Anderson K, Andre B, Bangham R, Benito R, Boeke JD, Bussey H, Chu AM, Connelly C, Davis K, Dietrich F, Dow SW, El Bakkoury M, Foury F, Friend SH, Gentalen E, Giaever G, Hegemann JH, Jones T, Laub M, Liao H, Liebundguth N, Lockhart DJ, Lucau-Danila A, Lussier M, M'Rabet N, Menard P, Mittmann M, Pai C, Rebischung C, Revuelta JL, Riles L, Roberts CJ, Ross-MacDonald P, Scherens B, Snyder M, Sookhai-Mahadeo S, Storms RK, Véronneau S, Voet M, Volckaert G, Ward TR, Wysocki R, Yen GS, Yu K, Zimmermann K, Philippsen P, Johnston M, Davis RW.

Science. 1999 Aug 6;285(5429):901-6.

PMID:
10436161
[PubMed - indexed for MEDLINE]
Free Article
4.

A small reservoir of disabled ORFs in the yeast genome and its implications for the dynamics of proteome evolution.

Harrison P, Kumar A, Lan N, Echols N, Snyder M, Gerstein M.

J Mol Biol. 2002 Feb 22;316(3):409-19.

PMID:
11866506
[PubMed - indexed for MEDLINE]
5.

A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection.

Hanada K, Zhang X, Borevitz JO, Li WH, Shiu SH.

Genome Res. 2007 May;17(5):632-40. Epub 2007 Mar 29.

PMID:
17395691
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Parallel identification of new genes in Saccharomyces cerevisiae.

Oshiro G, Wodicka LM, Washburn MP, Yates JR 3rd, Lockhart DJ, Winzeler EA.

Genome Res. 2002 Aug;12(8):1210-20.

PMID:
12176929
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

High-dimensional and large-scale phenotyping of yeast mutants.

Ohya Y, Sese J, Yukawa M, Sano F, Nakatani Y, Saito TL, Saka A, Fukuda T, Ishihara S, Oka S, Suzuki G, Watanabe M, Hirata A, Ohtani M, Sawai H, Fraysse N, Latgé JP, François JM, Aebi M, Tanaka S, Muramatsu S, Araki H, Sonoike K, Nogami S, Morishita S.

Proc Natl Acad Sci U S A. 2005 Dec 27;102(52):19015-20. Epub 2005 Dec 19.

PMID:
16365294
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Deletion of six open reading frames from the left arm of chromosome IV of Saccharomyces cerevisiae.

Tuller G, Prein B, Jandrositz A, Daum G, Kohlwein SD.

Yeast. 1999 Sep 15;15(12):1275-85.

PMID:
10487930
[PubMed - indexed for MEDLINE]
10.

Disruption of six novel ORFs on the left arm of chromosome XII reveals one gene essential for vegetative growth of Saccharomyces cerevisiae.

Zhang N, Ismail T, Wu J, Woodwark KC, Gardner DC, Walmsley RM, Oliver SG.

Yeast. 1999 Sep 15;15(12):1287-96.

PMID:
10487931
[PubMed - indexed for MEDLINE]
11.

Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation.

Cvijović M, Dalevi D, Bilsland E, Kemp GJ, Sunnerhagen P.

BMC Bioinformatics. 2007 Aug 8;8:295.

PMID:
17686169
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Disruption of six open reading frames on chromosome X of Saccharomyces cerevisiae reveals a cluster of four essential genes.

Esser K, Scholle B, Michaelis G.

Yeast. 1999 Jul;15(10B):921-33.

PMID:
10407272
[PubMed - indexed for MEDLINE]
13.

Deletion of the nuclear gene encoding the mitochondrial citrate transport protein from Saccharomyces cerevisiae.

Kaplan RS, Mayor JA, Kakhniashvili D, Gremse DA, Wood DO, Nelson DR.

Biochem Biophys Res Commun. 1996 Sep 24;226(3):657-62.

PMID:
8831672
[PubMed - indexed for MEDLINE]
14.

Chemical-genetic approaches for exploring the mode of action of natural products.

Lopez A, Parsons AB, Nislow C, Giaever G, Boone C.

Prog Drug Res. 2008;66:237, 239-71. Review.

PMID:
18416308
[PubMed - indexed for MEDLINE]
15.

Large-scale analysis of the yeast genome by transposon tagging and gene disruption.

Ross-Macdonald P, Coelho PS, Roemer T, Agarwal S, Kumar A, Jansen R, Cheung KH, Sheehan A, Symoniatis D, Umansky L, Heidtman M, Nelson FK, Iwasaki H, Hager K, Gerstein M, Miller P, Roeder GS, Snyder M.

Nature. 1999 Nov 25;402(6760):413-8.

PMID:
10586881
[PubMed - indexed for MEDLINE]
16.

Comparative genomics reveals long, evolutionarily conserved, low-complexity islands in yeast proteins.

Romov PA, Li F, Lipke PN, Epstein SL, Qiu WG.

J Mol Evol. 2006 Sep;63(3):415-25. Epub 2006 Aug 21.

PMID:
16927006
[PubMed - indexed for MEDLINE]
17.

Large-scale phenotypic analysis--the pilot project on yeast chromosome III.

Rieger KJ, Kaniak A, Coppée JY, Aljinovic G, Baudin-Baillieu A, Orlowska G, Gromadka R, Groudinsky O, Di Rago JP, Slonimski PP.

Yeast. 1997 Dec;13(16):1547-62.

PMID:
9509574
[PubMed - indexed for MEDLINE]
18.

RNA degradation in fission yeast mitochondria is stimulated by a member of a new family of proteins that are conserved in lower eukaryotes.

Wiesenberger G, Speer F, Haller G, Bonnefoy N, Schleiffer A, Schafer B.

J Mol Biol. 2007 Mar 30;367(3):681-91. Epub 2007 Jan 10.

PMID:
17292401
[PubMed - indexed for MEDLINE]
19.

Large-scale phenotypic analysis reveals identical contributions to cell functions of known and unknown yeast genes.

Bianchi MM, Ngo S, Vandenbol M, Sartori G, Morlupi A, Ricci C, Stefani S, Morlino GB, Hilger F, Carignani G, Slonimski PP, Frontali L.

Yeast. 2001 Nov;18(15):1397-412.

PMID:
11746602
[PubMed - indexed for MEDLINE]
20.

Combining in silico prediction and ribosome profiling in a genome-wide search for novel putatively coding sORFs.

Crappé J, Van Criekinge W, Trooskens G, Hayakawa E, Luyten W, Baggerman G, Menschaert G.

BMC Genomics. 2013 Sep 23;14:648. doi: 10.1186/1471-2164-14-648.

PMID:
24059539
[PubMed - indexed for MEDLINE]
Free PMC Article

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