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Items: 1 to 20 of 115

1.

Gene expression level shapes the amino acid usages in Prochlorococcus marinus MED4.

Banerjee T, Ghosh TC.

J Biomol Struct Dyn. 2006 Apr;23(5):547-54.

PMID:
16494504
2.

Evolutionary forces in shaping the codon and amino acid usages in Blochmannia floridanus.

Banerjee T, Basak S, Gupta SK, Ghosh TC.

J Biomol Struct Dyn. 2004 Aug;22(1):13-23.

PMID:
15214801
3.

Synonymous codon usage in Lactococcus lactis: mutational bias versus translational selection.

Gupta SK, Bhattacharyya TK, Ghosh TC.

J Biomol Struct Dyn. 2004 Feb;21(4):527-36.

PMID:
14692797
4.

[Analysis of factors shaping S. pneumoniae codon usage].

Hou ZC, Yang N.

Yi Chuan Xue Bao. 2002;29(8):747-52. Chinese.

PMID:
12200868
6.
7.

Codon usage patterns and adaptive evolution of marine unicellular cyanobacteria Synechococcus and Prochlorococcus.

Yu T, Li J, Yang Y, Qi L, Chen B, Zhao F, Bao Q, Wu J.

Mol Phylogenet Evol. 2012 Jan;62(1):206-13. doi: 10.1016/j.ympev.2011.09.013. Epub 2011 Oct 21.

PMID:
22040764
8.

Factors affecting codon usage in Yersinia pestis.

Hou ZC, Yang N.

Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 2003 Jun;35(6):580-6.

9.

A green light-absorbing phycoerythrin is present in the high-light-adapted marine cyanobacterium Prochlorococcus sp. MED4.

Steglich C, Frankenberg-Dinkel N, Penno S, Hess WR.

Environ Microbiol. 2005 Oct;7(10):1611-8.

PMID:
16156734
10.

Reinvestigating the codon and amino acid usage of S. cerevisiae genome: a new insight from protein secondary structure analysis.

Kahali B, Basak S, Ghosh TC.

Biochem Biophys Res Commun. 2007 Mar 16;354(3):693-9. Epub 2007 Jan 17.

PMID:
17258174
11.

Analysis of the 3' ends of tRNA as the cause of insertion sites of foreign DNA in Prochlorococcus.

Liu HL, Zhu J.

J Zhejiang Univ Sci B. 2010 Sep;11(9):708-18. doi: 10.1631/jzus.B0900417.

12.

Synonymous codon usage in Thermosynechococcus elongatus (cyanobacteria) identifies the factors shaping codon usage variation.

Prabha R, Singh DP, Gupta SK, Farooqi S, Rai A.

Bioinformation. 2012;8(13):622-8. doi: 10.6026/97320630008622. Epub 2012 Jul 6.

13.

Comparative multivariate analysis of codon and amino acid usage in three Leishmania genomes.

Chauhan N, Vidyarthi AS, Poddar R.

Genomics Proteomics Bioinformatics. 2011 Dec;9(6):218-28. doi: 10.1016/S1672-0229(11)60025-9.

14.

Gender-specific selection on codon usage in plant genomes.

Whittle CA, Malik MR, Krochko JE.

BMC Genomics. 2007 Jun 13;8:169.

15.
16.

Comparative study on factors influencing the codon and amino acid usage in Lactobacillus sakei 23K and 13 other lactobacilli.

Nayak KC.

Mol Biol Rep. 2012 Jan;39(1):535-45. doi: 10.1007/s11033-011-0768-4. Epub 2011 May 7.

PMID:
21553051
17.

Identification of chlorophyllide a oxygenase in the Prochlorococcus genome by a comparative genomic approach.

Satoh S, Tanaka A.

Plant Cell Physiol. 2006 Dec;47(12):1622-9. Epub 2006 Oct 27.

PMID:
17071624
18.

Environmental sequence data from the Sargasso Sea reveal that the characteristics of genome reduction in Prochlorococcus are not a harbinger for an escalation in genetic drift.

Hu J, Blanchard JL.

Mol Biol Evol. 2009 Jan;26(1):5-13. doi: 10.1093/molbev/msn217. Epub 2008 Oct 8. Erratum in: Mol Biol Evol. 2009 May;26(5):1191.

19.

Accelerated evolution associated with genome reduction in a free-living prokaryote.

Dufresne A, Garczarek L, Partensky F.

Genome Biol. 2005;6(2):R14. Epub 2005 Jan 14.

20.

A hyperconserved protein in Prochlorococcus and marine Synechococcus.

Zhaxybayeva O, Gogarten JP, Doolittle WF.

FEMS Microbiol Lett. 2007 Sep;274(1):30-4. Epub 2007 Jun 15.

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