Similar articles for PMID: 16472402

Year	Number of Results
1958	1
1989	1
2001	1
2002	2
2003	3
2004	21
2005	25
2006	31
2007	20
2008	14
2009	10
2010	17
2011	11
2012	16
2013	12
2014	8
2015	10
2016	7
2017	3
2018	4
2019	1
2020	1
2022	7
2024	0

1

Computational models with thermodynamic and composition features improve siRNA design.

Shabalina SA, Spiridonov AN, Ogurtsov AY. Shabalina SA, et al. BMC Bioinformatics. 2006 Feb 12;7:65. doi: 10.1186/1471-2105-7-65. BMC Bioinformatics. 2006. PMID: 16472402 Free PMC article.

2

Prediction of siRNA knockdown efficiency using artificial neural network models.

Ge G, Wong GW, Luo B. Ge G, et al. Biochem Biophys Res Commun. 2005 Oct 21;336(2):723-8. doi: 10.1016/j.bbrc.2005.08.147. Biochem Biophys Res Commun. 2005. PMID: 16153609

3

Design of a genome-wide siRNA library using an artificial neural network.

Huesken D, Lange J, Mickanin C, Weiler J, Asselbergs F, Warner J, Meloon B, Engel S, Rosenberg A, Cohen D, Labow M, Reinhardt M, Natt F, Hall J. Huesken D, et al. Nat Biotechnol. 2005 Aug;23(8):995-1001. doi: 10.1038/nbt1118. Epub 2005 Jul 17. Nat Biotechnol. 2005. PMID: 16025102

4

The impact of target site accessibility on the design of effective siRNAs.

Tafer H, Ameres SL, Obernosterer G, Gebeshuber CA, Schroeder R, Martinez J, Hofacker IL. Tafer H, et al. Nat Biotechnol. 2008 May;26(5):578-83. doi: 10.1038/nbt1404. Epub 2008 Apr 27. Nat Biotechnol. 2008. PMID: 18438400

5

An algorithm for selection of functional siRNA sequences.

Amarzguioui M, Prydz H. Amarzguioui M, et al. Biochem Biophys Res Commun. 2004 Apr 16;316(4):1050-8. doi: 10.1016/j.bbrc.2004.02.157. Biochem Biophys Res Commun. 2004. PMID: 15044091

6

Identification of sequence motifs significantly associated with antisense activity.

McQuisten KA, Peek AS. McQuisten KA, et al. BMC Bioinformatics. 2007 Jun 7;8:184. doi: 10.1186/1471-2105-8-184. BMC Bioinformatics. 2007. PMID: 17555590 Free PMC article.

7

siRNA becomes smart and intelligent.

Miyagishi M, Taira K. Miyagishi M, et al. Nat Biotechnol. 2005 Aug;23(8):946-7. doi: 10.1038/nbt0805-946. Nat Biotechnol. 2005. PMID: 16082364 No abstract available.

8

Integrated siRNA design based on surveying of features associated with high RNAi effectiveness.

Gong W, Ren Y, Xu Q, Wang Y, Lin D, Zhou H, Li T. Gong W, et al. BMC Bioinformatics. 2006 Nov 27;7:516. doi: 10.1186/1471-2105-7-516. BMC Bioinformatics. 2006. PMID: 17129386 Free PMC article.

9

RFRCDB-siRNA: improved design of siRNAs by random forest regression model coupled with database searching.

Jiang P, Wu H, Da Y, Sang F, Wei J, Sun X, Lu Z. Jiang P, et al. Comput Methods Programs Biomed. 2007 Sep;87(3):230-8. doi: 10.1016/j.cmpb.2007.06.001. Epub 2007 Jul 17. Comput Methods Programs Biomed. 2007. PMID: 17644215

10

siRNA selection criteria--statistical analyses of applicability and significance.

Bradác I, Svobodová Vareková R, Wacenovsky M, Skrdla M, Plchút M, Polcík M. Bradác I, et al. Biochem Biophys Res Commun. 2007 Jul 20;359(1):83-7. doi: 10.1016/j.bbrc.2007.05.056. Epub 2007 May 21. Biochem Biophys Res Commun. 2007. PMID: 17524355

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