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Results: 1 to 20 of 151

Similar articles for PubMed (Select 16465620)

1.

A comparison of phasing algorithms for trios and unrelated individuals.

Marchini J, Cutler D, Patterson N, Stephens M, Eskin E, Halperin E, Lin S, Qin ZS, Munro HM, Abecasis GR, Donnelly P; International HapMap Consortium.

Am J Hum Genet. 2006 Mar;78(3):437-50. Epub 2006 Jan 26.

2.

Haplotype phasing and inheritance of copy number variants in nuclear families.

Palta P, Kaplinski L, Nagirnaja L, Veidenberg A, Möls M, Nelis M, Esko T, Metspalu A, Laan M, Remm M.

PLoS One. 2015 Apr 8;10(4):e0122713. doi: 10.1371/journal.pone.0122713. eCollection 2015.

3.

A rapid molecular approach for chromosomal phasing.

Regan JF, Kamitaki N, Legler T, Cooper S, Klitgord N, Karlin-Neumann G, Wong C, Hodges S, Koehler R, Tzonev S, McCarroll SA.

PLoS One. 2015 Mar 4;10(3):e0118270. doi: 10.1371/journal.pone.0118270. eCollection 2015.

4.

WinHAP2: an extremely fast haplotype phasing program for long genotype sequences.

Pan W, Zhao Y, Xu Y, Zhou F.

BMC Bioinformatics. 2014 May 30;15:164. doi: 10.1186/1471-2105-15-164.

5.

Haplotype association analysis of combining unrelated case-control and triads with consideration of population stratification.

Wen SH, Tsai MY.

Front Genet. 2014 Apr 29;5:103. doi: 10.3389/fgene.2014.00103. eCollection 2014.

6.

Reducing pervasive false-positive identical-by-descent segments detected by large-scale pedigree analysis.

Durand EY, Eriksson N, McLean CY.

Mol Biol Evol. 2014 Aug;31(8):2212-22. doi: 10.1093/molbev/msu151. Epub 2014 Apr 30.

7.

A general approach for haplotype phasing across the full spectrum of relatedness.

O'Connell J, Gurdasani D, Delaneau O, Pirastu N, Ulivi S, Cocca M, Traglia M, Huang J, Huffman JE, Rudan I, McQuillan R, Fraser RM, Campbell H, Polasek O, Asiki G, Ekoru K, Hayward C, Wright AF, Vitart V, Navarro P, Zagury JF, Wilson JF, Toniolo D, Gasparini P, Soranzo N, Sandhu MS, Marchini J.

PLoS Genet. 2014 Apr 17;10(4):e1004234. doi: 10.1371/journal.pgen.1004234. eCollection 2014 Apr.

8.

Maximum parsimony xor haplotyping by sparse dictionary selection.

Elmas A, Jajamovich GH, Wang X.

BMC Genomics. 2013 Sep 23;14:645. doi: 10.1186/1471-2164-14-645.

9.

FNphasing: a novel fast heuristic algorithm for haplotype phasing based on flow network model.

Yang J, Xu Y, Yao X, Chen G.

IEEE/ACM Trans Comput Biol Bioinform. 2013 Mar-Apr;10(2):372-82. doi: 10.1109/TCBB.2013.18.

PMID:
23929861
10.

A fast and accurate algorithm for diploid individual haplotype reconstruction.

Wu J, Liang B.

J Bioinform Comput Biol. 2013 Aug;11(4):1350010. doi: 10.1142/S0219720013500108. Epub 2013 Jun 30.

PMID:
23859274
11.

Breakdown of methods for phasing and imputation in the presence of double genotype sharing.

Nettelblad C.

PLoS One. 2013;8(3):e60354. doi: 10.1371/journal.pone.0060354. Epub 2013 Mar 28.

12.

Inference of identity by descent in population isolates and optimal sequencing studies.

Glodzik D, Navarro P, Vitart V, Hayward C, McQuillan R, Wild SH, Dunlop MG, Rudan I, Campbell H, Haley C, Wright AF, Wilson JF, McKeigue P.

Eur J Hum Genet. 2013 Oct;21(10):1140-5. doi: 10.1038/ejhg.2012.307. Epub 2013 Jan 30.

13.

Hap-seqX: expedite algorithm for haplotype phasing with imputation using sequence data.

He D, Eskin E.

Gene. 2013 Apr 10;518(1):2-6. doi: 10.1016/j.gene.2012.11.093. Epub 2012 Dec 23.

PMID:
23269365
14.

SHIPS: Spectral Hierarchical clustering for the Inference of Population Structure in genetic studies.

Bouaziz M, Paccard C, Guedj M, Ambroise C.

PLoS One. 2012;7(10):e45685. doi: 10.1371/journal.pone.0045685. Epub 2012 Oct 12.

15.

Genotype calling and haplotyping in parent-offspring trios.

Chen W, Li B, Zeng Z, Sanna S, Sidore C, Busonero F, Kang HM, Li Y, Abecasis GR.

Genome Res. 2013 Jan;23(1):142-51. doi: 10.1101/gr.142455.112. Epub 2012 Oct 11.

16.

Utilizing graph theory to select the largest set of unrelated individuals for genetic analysis.

Staples J, Nickerson DA, Below JE.

Genet Epidemiol. 2013 Feb;37(2):136-41. doi: 10.1002/gepi.21684. Epub 2012 Sep 19.

17.

Phasing of many thousands of genotyped samples.

Williams AL, Patterson N, Glessner J, Hakonarson H, Reich D.

Am J Hum Genet. 2012 Aug 10;91(2):238-51. doi: 10.1016/j.ajhg.2012.06.013.

18.

Identifying mutation regions for closely related individuals without a known pedigree.

Cui W, Wang L.

BMC Bioinformatics. 2012 Jun 25;13:146. doi: 10.1186/1471-2105-13-146.

19.

A unified framework for haplotype inference in nuclear families.

Iliadis A, Anastassiou D, Wang X.

Ann Hum Genet. 2012 Jul;76(4):312-25. doi: 10.1111/j.1469-1809.2012.00715.x. Epub 2012 May 21.

PMID:
22607042
20.

Inferring haplotypes of copy number variations from high-throughput data with uncertainty.

Kato M, Yoon S, Hosono N, Leotta A, Sebat J, Tsunoda T, Zhang MQ.

G3 (Bethesda). 2011 Jun;1(1):35-42. doi: 10.1534/g3.111.000174. Epub 2011 Jun 1.

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