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Results: 1 to 20 of 172

1.

The Soybean Genome Database (SoyGD): a browser for display of duplicated, polyploid, regions and sequence tagged sites on the integrated physical and genetic maps of Glycine max.

Shultz JL, Kurunam D, Shopinski K, Iqbal MJ, Kazi S, Zobrist K, Bashir R, Yaegashi S, Lavu N, Afzal AJ, Yesudas CR, Kassem MA, Wu C, Zhang HB, Town CD, Meksem K, Lightfoot DA.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D758-65.

PMID:
16381975
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Genetic marker anchoring by six-dimensional pools for development of a soybean physical map.

Wu X, Zhong G, Findley SD, Cregan P, Stacey G, Nguyen HT.

BMC Genomics. 2008 Jan 22;9:28. doi: 10.1186/1471-2164-9-28.

PMID:
18211698
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Re-annotation of the physical map of Glycine max for polyploid-like regions by BAC end sequence driven whole genome shotgun read assembly.

Saini N, Shultz J, Lightfoot DA.

BMC Genomics. 2008 Jul 7;9:323. doi: 10.1186/1471-2164-9-323.

PMID:
18606011
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

The development of BAC-end sequence-based microsatellite markers and placement in the physical and genetic maps of soybean.

Shultz JL, Kazi S, Bashir R, Afzal JA, Lightfoot DA.

Theor Appl Genet. 2007 Apr;114(6):1081-90. Epub 2007 Feb 8.

PMID:
17287974
[PubMed - indexed for MEDLINE]
5.
6.

A bacterial artificial chromosome based physical map of the Ustilago maydis genome.

Meksem K, Shultz J, Tebbji F, Jamai A, Henrich J, Kranz H, Arenz M, Schlueter T, Ishihara H, Jyothi LN, Zhang HB, Lightfoot DA.

Genome. 2005 Apr;48(2):207-16.

PMID:
15838542
[PubMed - indexed for MEDLINE]
7.

Feasibility of physical map construction from fingerprinted bacterial artificial chromosome libraries of polyploid plant species.

Luo MC, Ma Y, You FM, Anderson OD, Kopecký D, Simková H, Safár J, Dolezel J, Gill B, McGuire PE, Dvorak J.

BMC Genomics. 2010 Feb 19;11:122. doi: 10.1186/1471-2164-11-122.

PMID:
20170511
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Soybean bacterial artificial chromosome contigs anchored with RFLPs: insights into genome duplication and gene clustering.

Mudge J, Huihuang Y, Denny RL, Howe DK, Danesh D, Marek LF, Retzel E, Shoemaker RC, Young ND.

Genome. 2004 Apr;47(2):361-72.

PMID:
15060589
[PubMed - indexed for MEDLINE]
9.

Comparative genomic analysis of sequences sampled from a small region on soybean (Glycine max) molecular linkage group G.

Foster-Hartnett D, Mudge J, Larsen D, Danesh D, Yan H, Denny R, Peñuela S, Young ND.

Genome. 2002 Aug;45(4):634-45.

PMID:
12175066
[PubMed - indexed for MEDLINE]
10.

iMap: a database-driven utility to integrate and access the genetic and physical maps of maize.

Fang Z, Cone K, Sanchez-Villeda H, Polacco M, McMullen M, Schroeder S, Gardiner J, Davis G, Havermann S, Yim Y, Vroh Bi I, Coe E.

Bioinformatics. 2003 Nov 1;19(16):2105-11.

PMID:
14594716
[PubMed - indexed for MEDLINE]
Free Article
11.

A high-throughput AFLP-based method for constructing integrated genetic and physical maps: progress toward a sorghum genome map.

Klein PE, Klein RR, Cartinhour SW, Ulanch PE, Dong J, Obert JA, Morishige DT, Schlueter SD, Childs KL, Ale M, Mullet JE.

Genome Res. 2000 Jun;10(6):789-807.

PMID:
10854411
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps.

Shoemaker RC, Grant D, Olson T, Warren WC, Wing R, Yu Y, Kim H, Cregan P, Joseph B, Futrell-Griggs M, Nelson W, Davito J, Walker J, Wallis J, Kremitski C, Scheer D, Clifton SW, Graves T, Nguyen H, Wu X, Luo M, Dvorak J, Nelson R, Cannon S, Tomkins J, Schmutz J, Stacey G, Jackson S.

Genome. 2008 Apr;51(4):294-302. doi: 10.1139/G08-010.

PMID:
18356965
[PubMed - indexed for MEDLINE]
13.

Estimates of conserved microsynteny among the genomes of Glycine max, Medicago truncatula and Arabidopsis thaliana.

Yan HH, Mudge J, Kim DJ, Larsen D, Shoemaker RC, Cook DR, Young ND.

Theor Appl Genet. 2003 May;106(7):1256-65. Epub 2003 Jan 25.

PMID:
12748777
[PubMed - indexed for MEDLINE]
14.

Construction and characterization of a soybean bacterial artificial chromosome library and use of multiple complementary libraries for genome physical mapping.

Wu CC, Nimmakayala P, Santos FA, Springman R, Scheuring C, Meksem K, Lightfoot DA, Zhang HB.

Theor Appl Genet. 2004 Sep;109(5):1041-50. Epub 2004 May 26.

PMID:
15164176
[PubMed - indexed for MEDLINE]
15.

Comparative physical mapping reveals features of microsynteny between Glycine max, Medicago truncatula, and Arabidopsis thaliana.

Yan HH, Mudge J, Kim DJ, Shoemaker RC, Cook DR, Young ND.

Genome. 2004 Feb;47(1):141-55.

PMID:
15060611
[PubMed - indexed for MEDLINE]
16.

A BAC- and BIBAC-based physical map of the soybean genome.

Wu C, Sun S, Nimmakayala P, Santos FA, Meksem K, Springman R, Ding K, Lightfoot DA, Zhang HB.

Genome Res. 2004 Feb;14(2):319-26. Epub 2004 Jan 12.

PMID:
14718376
[PubMed - indexed for MEDLINE]
Free PMC Article
17.
18.

A plant-transformation-competent BIBAC/BAC-based map of rice for functional analysis and genetic engineering of its genomic sequence.

Li Y, Uhm T, Ren C, Wu C, Santos TS, Lee MK, Yan B, Santos F, Zhang A, Scheuring C, Sanchez A, Millena AC, Nguyen HT, Kou H, Liu D, Zhang HB.

Genome. 2007 Mar;50(3):278-88.

PMID:
17502901
[PubMed - indexed for MEDLINE]
19.

The first generation of a BAC-based physical map of Brassica rapa.

Mun JH, Kwon SJ, Yang TJ, Kim HS, Choi BS, Baek S, Kim JS, Jin M, Kim JA, Lim MH, Lee SI, Kim HI, Kim H, Lim YP, Park BS.

BMC Genomics. 2008 Jun 12;9:280. doi: 10.1186/1471-2164-9-280.

PMID:
18549474
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps.

Yim YS, Moak P, Sanchez-Villeda H, Musket TA, Close P, Klein PE, Mullet JE, McMullen MD, Fang Z, Schaeffer ML, Gardiner JM, Coe EH Jr, Davis GL.

BMC Genomics. 2007 Feb 9;8:47.

PMID:
17291341
[PubMed - indexed for MEDLINE]
Free PMC Article

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