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Items: 1 to 20 of 135

1.

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae.

Galagan JE, Calvo SE, Cuomo C, Ma LJ, Wortman JR, Batzoglou S, Lee SI, Baştürkmen M, Spevak CC, Clutterbuck J, Kapitonov V, Jurka J, Scazzocchio C, Farman M, Butler J, Purcell S, Harris S, Braus GH, Draht O, Busch S, D'Enfert C, Bouchier C, Goldman GH, Bell-Pedersen D, Griffiths-Jones S, Doonan JH, Yu J, Vienken K, Pain A, Freitag M, Selker EU, Archer DB, Peñalva MA, Oakley BR, Momany M, Tanaka T, Kumagai T, Asai K, Machida M, Nierman WC, Denning DW, Caddick M, Hynes M, Paoletti M, Fischer R, Miller B, Dyer P, Sachs MS, Osmani SA, Birren BW.

Nature. 2005 Dec 22;438(7071):1105-15.

PMID:
16372000
2.

Genomics of industrial Aspergilli and comparison with toxigenic relatives.

Machida M, Terabayashi Y, Sano M, Yamane N, Tamano K, Payne GA, Yu J, Cleveland TE, Nierman WC.

Food Addit Contam Part A Chem Anal Control Expo Risk Assess. 2008 Sep;25(9):1147-51. doi: 10.1080/02652030802273114.

PMID:
18798040
3.

Insight into the genome of Aspergillus fumigatus: analysis of a 922 kb region encompassing the nitrate assimilation gene cluster.

Pain A, Woodward J, Quail MA, Anderson MJ, Clark R, Collins M, Fosker N, Fraser A, Harris D, Larke N, Murphy L, Humphray S, O'Neil S, Pertea M, Price C, Rabbinowitsch E, Rajandream MA, Salzberg S, Saunders D, Seeger K, Sharp S, Warren T, Denning DW, Barrell B, Hall N.

Fungal Genet Biol. 2004 Apr;41(4):443-53.

PMID:
14998527
4.

Mating type protein Mat1-2 from asexual Aspergillus fumigatus drives sexual reproduction in fertile Aspergillus nidulans.

Pyrzak W, Miller KY, Miller BL.

Eukaryot Cell. 2008 Jun;7(6):1029-40. doi: 10.1128/EC.00380-07. Epub 2008 Feb 1.

5.

Genome sequencing and analysis of Aspergillus oryzae.

Machida M, Asai K, Sano M, Tanaka T, Kumagai T, Terai G, Kusumoto K, Arima T, Akita O, Kashiwagi Y, Abe K, Gomi K, Horiuchi H, Kitamoto K, Kobayashi T, Takeuchi M, Denning DW, Galagan JE, Nierman WC, Yu J, Archer DB, Bennett JW, Bhatnagar D, Cleveland TE, Fedorova ND, Gotoh O, Horikawa H, Hosoyama A, Ichinomiya M, Igarashi R, Iwashita K, Juvvadi PR, Kato M, Kato Y, Kin T, Kokubun A, Maeda H, Maeyama N, Maruyama J, Nagasaki H, Nakajima T, Oda K, Okada K, Paulsen I, Sakamoto K, Sawano T, Takahashi M, Takase K, Terabayashi Y, Wortman JR, Yamada O, Yamagata Y, Anazawa H, Hata Y, Koide Y, Komori T, Koyama Y, Minetoki T, Suharnan S, Tanaka A, Isono K, Kuhara S, Ogasawara N, Kikuchi H.

Nature. 2005 Dec 22;438(7071):1157-61.

PMID:
16372010
6.

Comparative genome analysis between Aspergillus oryzae strains reveals close relationship between sites of mutation localization and regions of highly divergent genes among Aspergillus species.

Umemura M, Koike H, Yamane N, Koyama Y, Satou Y, Kikuzato I, Teruya M, Tsukahara M, Imada Y, Wachi Y, Miwa Y, Yano S, Tamano K, Kawarabayasi Y, Fujimori KE, Machida M, Hirano T.

DNA Res. 2012 Oct;19(5):375-82. doi: 10.1093/dnares/dss019. Epub 2012 Aug 21.

7.

G-protein and cAMP-mediated signaling in aspergilli: a genomic perspective.

Lafon A, Han KH, Seo JA, Yu JH, d'Enfert C.

Fungal Genet Biol. 2006 Jul;43(7):490-502. Epub 2006 Mar 20.

PMID:
16546420
8.

Genomics of Aspergillus oryzae.

Kobayashi T, Abe K, Asai K, Gomi K, Juvvadi PR, Kato M, Kitamoto K, Takeuchi M, Machida M.

Biosci Biotechnol Biochem. 2007 Mar;71(3):646-70. Epub 2007 Mar 7. Review.

9.

[LTR retrotransposons from genomes of Aspergillus fumigatus and A. nidulans].

Novikova OS, Fet V, Blinov AG.

Mol Biol (Mosk). 2007 Sep-Oct;41(5):830-8. Russian.

PMID:
18240565
10.

Evidence for sexuality in the opportunistic fungal pathogen Aspergillus fumigatus.

Paoletti M, Rydholm C, Schwier EU, Anderson MJ, Szakacs G, Lutzoni F, Debeaupuis JP, Latgé JP, Denning DW, Dyer PS.

Curr Biol. 2005 Jul 12;15(13):1242-8.

11.

Elusive origins of the extra genes in Aspergillus oryzae.

Khaldi N, Wolfe KH.

PLoS One. 2008 Aug 22;3(8):e3036. doi: 10.1371/journal.pone.0003036.

12.

Presence and functionality of mating type genes in the supposedly asexual filamentous fungus Aspergillus oryzae.

Wada R, Maruyama J, Yamaguchi H, Yamamoto N, Wagu Y, Paoletti M, Archer DB, Dyer PS, Kitamoto K.

Appl Environ Microbiol. 2012 Apr;78(8):2819-29. doi: 10.1128/AEM.07034-11. Epub 2012 Feb 10.

13.

Genomics reveals sexual secrets of Aspergillus.

Dyer PS, Paoletti M, Archer DB.

Microbiology. 2003 Sep;149(Pt 9):2301-3. No abstract available.

PMID:
12949156
14.

Using a new GPI-anchored-protein identification system to mine the protein databases of Aspergillus fumigatus, Aspergillus nidulans, and Aspergillus oryzae.

Cao W, Maruyama J, Kitamoto K, Sumikoshi K, Terada T, Nakamura S, Shimizu K.

J Gen Appl Microbiol. 2009 Oct;55(5):381-93.

15.
16.

The asexual pathogen aspergillus fumigatus expresses functional determinants of Aspergillus nidulans sexual development.

Grosse V, Krappmann S.

Eukaryot Cell. 2008 Oct;7(10):1724-32. doi: 10.1128/EC.00157-08. Epub 2008 Aug 29.

17.

Identification of putative regulatory upstream ORFs in the yeast genome using heuristics and evolutionary conservation.

Cvijović M, Dalevi D, Bilsland E, Kemp GJ, Sunnerhagen P.

BMC Bioinformatics. 2007 Aug 8;8:295.

18.

Base composition and nucleosome density in exonic and intronic regions in genes of the filamentous ascomycetes Aspergillus nidulans and Aspergillus oryzae.

Nishida H, Katayama T, Suzuki Y, Kondo S, Horiuchi H.

Gene. 2013 Aug 1;525(1):5-10. doi: 10.1016/j.gene.2013.04.077. Epub 2013 May 8.

PMID:
23664982
19.

Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae.

Coutinho PM, Andersen MR, Kolenova K, vanKuyk PA, Benoit I, Gruben BS, Trejo-Aguilar B, Visser H, van Solingen P, Pakula T, Seiboth B, Battaglia E, Aguilar-Osorio G, de Jong JF, Ohm RA, Aguilar M, Henrissat B, Nielsen J, Stålbrand H, de Vries RP.

Fungal Genet Biol. 2009 Mar;46 Suppl 1:S161-S169.

PMID:
19618505
20.

Structural and functional analysis of the amdR regulatory gene of Aspergillus oryzae.

Wang XW, Hynes MJ, Davis MA.

Gene. 1992 Dec 1;122(1):147-54.

PMID:
1452021
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