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Similar articles for PubMed (Select 16086846)

1.

Genomic mapping of RNA polymerase II reveals sites of co-transcriptional regulation in human cells.

Brodsky AS, Meyer CA, Swinburne IA, Hall G, Keenan BJ, Liu XS, Fox EA, Silver PA.

Genome Biol. 2005;6(8):R64. Epub 2005 Jul 15.

2.

Genomic analyses of transcription factor binding, histone acetylation, and gene expression reveal mechanistically distinct classes of estrogen-regulated promoters.

Kininis M, Chen BS, Diehl AG, Isaacs GD, Zhang T, Siepel AC, Clark AG, Kraus WL.

Mol Cell Biol. 2007 Jul;27(14):5090-104. Epub 2007 May 21.

3.

Transcriptional pause, arrest and termination sites for RNA polymerase II in mammalian N- and c-myc genes.

Keene RG, Mueller A, Landick R, London L.

Nucleic Acids Res. 1999 Aug 1;27(15):3173-82.

6.

Characterization of human deoxyribonuclease I gene (DNASE1) promoters reveals the utilization of two transcription-starting exons and the involvement of Sp1 in its transcriptional regulation.

Kominato Y, Ueki M, Iida R, Kawai Y, Nakajima T, Makita C, Itoi M, Tajima Y, Kishi K, Yasuda T.

FEBS J. 2006 Jul;273(13):3094-105. Epub 2006 Jun 9.

PMID:
16771825
7.

Determination of mRNA fate by different RNA polymerase II promoters.

Enssle J, Kugler W, Hentze MW, Kulozik AE.

Proc Natl Acad Sci U S A. 1993 Nov 1;90(21):10091-5.

8.

Regulation of alternative splicing by a transcriptional enhancer through RNA pol II elongation.

Kadener S, Fededa JP, Rosbash M, Kornblihtt AR.

Proc Natl Acad Sci U S A. 2002 Jun 11;99(12):8185-90.

9.

Hypoxic regulation of telomerase gene expression by transcriptional and post-transcriptional mechanisms.

Anderson CJ, Hoare SF, Ashcroft M, Bilsland AE, Keith WN.

Oncogene. 2006 Jan 5;25(1):61-9.

PMID:
16170363
10.

Genome-wide RNA polymerase II: not genes only!

Koch F, Jourquin F, Ferrier P, Andrau JC.

Trends Biochem Sci. 2008 Jun;33(6):265-73. doi: 10.1016/j.tibs.2008.04.006. Epub 2008 May 6. Review.

PMID:
18467100
11.

Mapping of transcription start sites of human retina expressed genes.

Roni V, Carpio R, Wissinger B.

BMC Genomics. 2007 Feb 7;8:42.

12.

Genomic location of the human RNA polymerase II general machinery: evidence for a role of TFIIF and Rpb7 at both early and late stages of transcription.

Cojocaru M, Jeronimo C, Forget D, Bouchard A, Bergeron D, Côte P, Poirier GG, Greenblatt J, Coulombe B.

Biochem J. 2008 Jan 1;409(1):139-47.

13.

Transcriptional regulation of the mouse PNRC2 promoter by the nuclear factor Y (NFY) and E2F1.

Zhou D, Masri S, Ye JJ, Chen S.

Gene. 2005 Nov 21;361:89-100. Epub 2005 Sep 21.

PMID:
16181749
14.

Transcription factor SIII: a novel component of the RNA polymerase II elongation complex.

Conaway JW, Bradsher JN, Tan S, Conaway RC.

Cell Mol Biol Res. 1993;39(4):323-9.

PMID:
8312967
15.

On the importance of being co-transcriptional.

Neugebauer KM.

J Cell Sci. 2002 Oct 15;115(Pt 20):3865-71. Review.

16.

Intrinsic sites of transcription termination and pausing in the c-myc gene.

Kerppola TK, Kane CM.

Mol Cell Biol. 1988 Oct;8(10):4389-94.

17.

Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution.

Wilhelm BT, Marguerat S, Watt S, Schubert F, Wood V, Goodhead I, Penkett CJ, Rogers J, Bähler J.

Nature. 2008 Jun 26;453(7199):1239-43. doi: 10.1038/nature07002. Epub 2008 May 18.

PMID:
18488015
19.

Genomic localization of RNA binding proteins reveals links between pre-mRNA processing and transcription.

Swinburne IA, Meyer CA, Liu XS, Silver PA, Brodsky AS.

Genome Res. 2006 Jul;16(7):912-21. Epub 2006 Jun 12.

20.

Differential patterns of intronic and exonic DNA regions with respect to RNA polymerase II occupancy, nucleosome density and H3K36me3 marking in fission yeast.

Wilhelm BT, Marguerat S, Aligianni S, Codlin S, Watt S, Bähler J.

Genome Biol. 2011 Aug 22;12(8):R82. doi: 10.1186/gb-2011-12-8-r82.

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