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Results: 1 to 20 of 73

1.

Functional clustering algorithm for high-dimensional proteomics data.

Bensmail H, Aruna B, Semmes OJ, Haoudi A.

J Biomed Biotechnol. 2005 Jun 30;2005(2):80-6.

PMID:
16046812
[PubMed]
Free PMC Article
2.

A fuzzy relational clustering algorithm based on a dissimilarity measure extracted from data.

Corsini P, Lazzerini B, Marcelloni F.

IEEE Trans Syst Man Cybern B Cybern. 2004 Feb;34(1):775-82.

PMID:
15369122
[PubMed]
3.

Simultaneous clustering of gene expression data with clinical chemistry and pathological evaluations reveals phenotypic prototypes.

Bushel PR, Wolfinger RD, Gibson G.

BMC Syst Biol. 2007 Feb 23;1:15.

PMID:
17408499
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

A generalized clustering problem, with application to DNA microarrays.

Belitskaya-Levy I.

Stat Appl Genet Mol Biol. 2006;5:Article2. Epub 2006 Jan 6.

PMID:
16646866
[PubMed - indexed for MEDLINE]
5.

MALDI imaging combined with hierarchical clustering as a new tool for the interpretation of complex human cancers.

Deininger SO, Ebert MP, Fütterer A, Gerhard M, Röcken C.

J Proteome Res. 2008 Dec;7(12):5230-6. doi: 10.1021/pr8005777.

PMID:
19367705
[PubMed - indexed for MEDLINE]
6.

Wilks' Λ dissimilarity measures for gene clustering: an approach based on the identification of transcription modules.

Roverato A, Di Lascio FM.

Biometrics. 2011 Dec;67(4):1236-48. doi: 10.1111/j.1541-0420.2011.01571.x. Epub 2011 Mar 8.

PMID:
21385163
[PubMed - indexed for MEDLINE]
7.

LEGClust- a clustering algorithm based on layered entropic subgraphs.

Santos JM, Marques de Sa J, Alexandre LA.

IEEE Trans Pattern Anal Mach Intell. 2008 Jan;30(1):62-75.

PMID:
18000325
[PubMed - indexed for MEDLINE]
8.

Speeding up the Consensus Clustering methodology for microarray data analysis.

Giancarlo R, Utro F.

Algorithms Mol Biol. 2011 Jan 14;6(1):1. doi: 10.1186/1748-7188-6-1.

PMID:
21235792
[PubMed]
Free PMC Article
9.

Hierarchical Dirichlet process model for gene expression clustering.

Wang L, Wang X.

EURASIP J Bioinform Syst Biol. 2013 Apr 12;2013(1):5. doi: 10.1186/1687-4153-2013-5.

PMID:
23587447
[PubMed]
Free PMC Article
10.

Fuzzy ensemble clustering based on random projections for DNA microarray data analysis.

Avogadri R, Valentini G.

Artif Intell Med. 2009 Feb-Mar;45(2-3):173-83. doi: 10.1016/j.artmed.2008.07.014. Epub 2008 Sep 17.

PMID:
18801650
[PubMed - indexed for MEDLINE]
11.

Proteomic data analysis workflow for discovery of candidate biomarker peaks predictive of clinical outcome for patients with acute myeloid leukemia.

Forshed J, Pernemalm M, Tan CS, Lindberg M, Kanter L, Pawitan Y, Lewensohn R, Stenke L, Lehtiö J.

J Proteome Res. 2008 Jun;7(6):2332-41. doi: 10.1021/pr070482e. Epub 2008 May 2.

PMID:
18452325
[PubMed - indexed for MEDLINE]
12.

CLIFF: clustering of high-dimensional microarray data via iterative feature filtering using normalized cuts.

Xing EP, Karp RM.

Bioinformatics. 2001;17 Suppl 1:S306-15.

PMID:
11473022
[PubMed - indexed for MEDLINE]
Free Article
13.

Genome classification by gene distribution: an overlapping subspace clustering approach.

Li J, Halgamuge SK, Tang SL.

BMC Evol Biol. 2008 Apr 23;8:116. doi: 10.1186/1471-2148-8-116.

PMID:
18430250
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

K-ary clustering with optimal leaf ordering for gene expression data.

Bar-Joseph Z, Demaine ED, Gifford DK, Srebro N, Hamel AM, Jaakkola TS.

Bioinformatics. 2003 Jun 12;19(9):1070-8.

PMID:
12801867
[PubMed - indexed for MEDLINE]
Free Article
15.

A modified hyperplane clustering algorithm allows for efficient and accurate clustering of extremely large datasets.

Sharma A, Podolsky R, Zhao J, McIndoe RA.

Bioinformatics. 2009 May 1;25(9):1152-7. doi: 10.1093/bioinformatics/btp123. Epub 2009 Mar 4.

PMID:
19261720
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Methods for detecting functional classifications in neuroimaging data.

Bowman FD, Patel R, Lu C.

Hum Brain Mapp. 2004 Oct;23(2):109-19.

PMID:
15340933
[PubMed - indexed for MEDLINE]
17.

Gene expression module discovery using gibbs sampling.

Wu CJ, Fu Y, Murali TM, Kasif S.

Genome Inform. 2004;15(1):239-48.

PMID:
15712126
[PubMed - indexed for MEDLINE]
18.

A dynamically growing self-organizing tree (DGSOT) for hierarchical clustering gene expression profiles.

Luo F, Khan L, Bastani F, Yen IL, Zhou J.

Bioinformatics. 2004 Nov 1;20(16):2605-17. Epub 2004 May 6.

PMID:
15130935
[PubMed - indexed for MEDLINE]
Free Article
19.

An unsupervised hierarchical dynamic self-organizing approach to cancer class discovery and marker gene identification in microarray data.

Hsu AL, Tang SL, Halgamuge SK.

Bioinformatics. 2003 Nov 1;19(16):2131-40.

PMID:
14594719
[PubMed - indexed for MEDLINE]
Free Article
20.

An algorithm to infer similarity among cell types and organisms by examining the most expressed sequences.

Pinto SA, Ortega JM.

Genet Mol Res. 2008 Sep 30;7(3):933-47.

PMID:
18949711
[PubMed - indexed for MEDLINE]
Free Article

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