Similar articles for PMID: 16020468

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1

goCluster integrates statistical analysis and functional interpretation of microarray expression data.

Wrobel G, Chalmel F, Primig M. Wrobel G, et al. Bioinformatics. 2005 Sep 1;21(17):3575-7. doi: 10.1093/bioinformatics/bti574. Epub 2005 Jul 14. Bioinformatics. 2005. PMID: 16020468

2

FACT--a framework for the functional interpretation of high-throughput experiments.

Kokocinski F, Delhomme N, Wrobel G, Hummerich L, Toedt G, Lichter P. Kokocinski F, et al. BMC Bioinformatics. 2005 Jun 28;6:161. doi: 10.1186/1471-2105-6-161. BMC Bioinformatics. 2005. PMID: 15985174 Free PMC article.

3

twilight; a Bioconductor package for estimating the local false discovery rate.

Scheid S, Spang R. Scheid S, et al. Bioinformatics. 2005 Jun 15;21(12):2921-2. doi: 10.1093/bioinformatics/bti436. Epub 2005 Apr 7. Bioinformatics. 2005. PMID: 15817688

4

A mixture model with random-effects components for clustering correlated gene-expression profiles.

Ng SK, McLachlan GJ, Wang K, Ben-Tovim Jones L, Ng SW. Ng SK, et al. Bioinformatics. 2006 Jul 15;22(14):1745-52. doi: 10.1093/bioinformatics/btl165. Epub 2006 May 3. Bioinformatics. 2006. PMID: 16675467

5

Clusterv: a tool for assessing the reliability of clusters discovered in DNA microarray data.

Valentini G. Valentini G. Bioinformatics. 2006 Feb 1;22(3):369-70. doi: 10.1093/bioinformatics/bti817. Epub 2005 Dec 6. Bioinformatics. 2006. PMID: 16332708 Free article.

6

OrderedList--a bioconductor package for detecting similarity in ordered gene lists.

Lottaz C, Yang X, Scheid S, Spang R. Lottaz C, et al. Bioinformatics. 2006 Sep 15;22(18):2315-6. doi: 10.1093/bioinformatics/btl385. Epub 2006 Jul 14. Bioinformatics. 2006. PMID: 16844712

7

How does gene expression clustering work?

D'haeseleer P. D'haeseleer P. Nat Biotechnol. 2005 Dec;23(12):1499-501. doi: 10.1038/nbt1205-1499. Nat Biotechnol. 2005. PMID: 16333293 Review.

8

Weighted rank aggregation of cluster validation measures: a Monte Carlo cross-entropy approach.

Pihur V, Datta S, Datta S. Pihur V, et al. Bioinformatics. 2007 Jul 1;23(13):1607-15. doi: 10.1093/bioinformatics/btm158. Epub 2007 May 5. Bioinformatics. 2007. PMID: 17483500

9

I/NI-calls for the exclusion of non-informative genes: a highly effective filtering tool for microarray data.

Talloen W, Clevert DA, Hochreiter S, Amaratunga D, Bijnens L, Kass S, Göhlmann HW. Talloen W, et al. Bioinformatics. 2007 Nov 1;23(21):2897-902. doi: 10.1093/bioinformatics/btm478. Epub 2007 Oct 5. Bioinformatics. 2007. PMID: 17921172

10

Multidimensional local false discovery rate for microarray studies.

Ploner A, Calza S, Gusnanto A, Pawitan Y. Ploner A, et al. Bioinformatics. 2006 Mar 1;22(5):556-65. doi: 10.1093/bioinformatics/btk013. Epub 2005 Dec 20. Bioinformatics. 2006. PMID: 16368770

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