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Results: 1 to 20 of 166

1.

PEDSTATS: descriptive statistics, graphics and quality assessment for gene mapping data.

Wigginton JE, Abecasis GR.

Bioinformatics. 2005 Aug 15;21(16):3445-7. Epub 2005 Jun 9.

PMID:
15947021
[PubMed - indexed for MEDLINE]
Free Article
2.

GeneTools--application for functional annotation and statistical hypothesis testing.

Beisvag V, Jünge FK, Bergum H, Jølsum L, Lydersen S, Günther CC, Ramampiaro H, Langaas M, Sandvik AK, Laegreid A.

BMC Bioinformatics. 2006 Oct 24;7:470.

PMID:
17062145
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Ridom TraceEdit: a DNA trace editor and viewer.

Rothgänger J, Weniger M, Weniger T, Mellmann A, Harmsen D.

Bioinformatics. 2006 Feb 15;22(4):493-4. Epub 2005 Dec 15.

PMID:
16357036
[PubMed - indexed for MEDLINE]
Free Article
4.

MapLinker: a software tool that aids physical map-linked whole genome shotgun assembly.

Xu J, Gordon JI.

Bioinformatics. 2005 Apr 1;21(7):1265-6. Epub 2004 Nov 30.

PMID:
15572475
[PubMed - indexed for MEDLINE]
Free Article
5.

Installing and configuring CMap.

Faga B.

Curr Protoc Bioinformatics. 2007 Mar;Chapter 9:Unit 9.8. doi: 10.1002/0471250953.bi0908s17.

PMID:
18428796
[PubMed - indexed for MEDLINE]
6.

DNAVis: interactive visualization of comparative genome annotations.

Fiers MW, van de Wetering H, Peeters TH, van Wijk JJ, Nap JP.

Bioinformatics. 2006 Feb 1;22(3):354-5. Epub 2005 Dec 6.

PMID:
16332715
[PubMed - indexed for MEDLINE]
Free Article
7.

CGHMultiArray: exact P-values for multi-array comparative genomic hybridization data.

van de Wiel MA, Smeets SJ, Brakenhoff RH, Ylstra B.

Bioinformatics. 2005 Jul 15;21(14):3193-4. Epub 2005 May 6.

PMID:
15879450
[PubMed - indexed for MEDLINE]
Free Article
8.

Using the Ensembl genome server to browse genomic sequence data.

Fernández-Suárez XM, Schuster MK.

Curr Protoc Bioinformatics. 2007 Jan;Chapter 1:Unit 1.15. doi: 10.1002/0471250953.bi0115s16.

PMID:
18428779
[PubMed - indexed for MEDLINE]
9.

GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags.

Castrignanò T, De Meo PD, Grillo G, Liuni S, Mignone F, Talamo IG, Pesole G.

Bioinformatics. 2006 Feb 15;22(4):497-9. Epub 2005 Nov 2.

PMID:
16267081
[PubMed - indexed for MEDLINE]
Free Article
10.

Alvira: comparative genomics of viral strains.

Enault F, Fremez R, Baranowski E, Faraut T.

Bioinformatics. 2007 Aug 15;23(16):2178-9. Epub 2007 Jun 5.

PMID:
17550913
[PubMed - indexed for MEDLINE]
Free Article
11.

ACT: the Artemis Comparison Tool.

Carver TJ, Rutherford KM, Berriman M, Rajandream MA, Barrell BG, Parkhill J.

Bioinformatics. 2005 Aug 15;21(16):3422-3. Epub 2005 Jun 23.

PMID:
15976072
[PubMed - indexed for MEDLINE]
Free Article
12.

JLIN: a java based linkage disequilibrium plotter.

Carter KW, McCaskie PA, Palmer LJ.

BMC Bioinformatics. 2006 Feb 9;7:60.

PMID:
16466584
[PubMed - indexed for MEDLINE]
Free PMC Article
13.

The UCSC Genome Browser.

Karolchik D, Hinrichs AS, Kent WJ.

Curr Protoc Bioinformatics. 2007 Mar;Chapter 1:Unit 1.4. doi: 10.1002/0471250953.bi0104s17.

PMID:
18428780
[PubMed - indexed for MEDLINE]
14.

eQTL Viewer: visualizing how sequence variation affects genome-wide transcription.

Zou W, Aylor DL, Zeng ZB.

BMC Bioinformatics. 2007 Jan 9;8:7.

PMID:
17212828
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

WebArray: an online platform for microarray data analysis.

Xia X, McClelland M, Wang Y.

BMC Bioinformatics. 2005 Dec 21;6:306.

PMID:
16371165
[PubMed - indexed for MEDLINE]
Free PMC Article
16.

Using the NCBI Map Viewer to browse genomic sequence data.

Wolfsberg TG.

Curr Protoc Bioinformatics. 2007 Jan;Chapter 1:Unit 1.5. doi: 10.1002/0471250953.bi0105s16.

PMID:
18428781
[PubMed - indexed for MEDLINE]
17.

Statistical software for gene mapping by admixture linkage disequilibrium.

Montana G, Hoggart C.

Brief Bioinform. 2007 Nov;8(6):393-5. Epub 2007 Jul 18. Review.

PMID:
17640923
[PubMed - indexed for MEDLINE]
Free Article
18.

GenomeMatcher: a graphical user interface for DNA sequence comparison.

Ohtsubo Y, Ikeda-Ohtsubo W, Nagata Y, Tsuda M.

BMC Bioinformatics. 2008 Sep 16;9:376. doi: 10.1186/1471-2105-9-376.

PMID:
18793444
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Using the Generic Genome Browser (GBrowse).

Donlin MJ.

Curr Protoc Bioinformatics. 2007 Mar;Chapter 9:Unit 9.9. doi: 10.1002/0471250953.bi0909s17.

PMID:
18428797
[PubMed - indexed for MEDLINE]
20.

SEAN: SNP prediction and display program utilizing EST sequence clusters.

Huntley D, Baldo A, Johri S, Sergot M.

Bioinformatics. 2006 Feb 15;22(4):495-6. Epub 2005 Dec 15.

PMID:
16357032
[PubMed - indexed for MEDLINE]
Free Article

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