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Results: 1 to 20 of 95

1.

Clustering and conservation patterns of human microRNAs.

Altuvia Y, Landgraf P, Lithwick G, Elefant N, Pfeffer S, Aravin A, Brownstein MJ, Tuschl T, Margalit H.

Nucleic Acids Res. 2005 May 12;33(8):2697-706. Print 2005.

PMID:
15891114
[PubMed - indexed for MEDLINE]
Free PMC Article
2.

Evolutionary emergence of microRNAs in human embryonic stem cells.

Cao H, Yang CS, Rana TM.

PLoS One. 2008 Jul 30;3(7):e2820. doi: 10.1371/journal.pone.0002820.

PMID:
18665260
[PubMed - indexed for MEDLINE]
Free PMC Article
3.

Identification and characteristics of microRNAs from Bombyx mori.

He PA, Nie Z, Chen J, Chen J, Lv Z, Sheng Q, Zhou S, Gao X, Kong L, Wu X, Jin Y, Zhang Y.

BMC Genomics. 2008 May 28;9:248. doi: 10.1186/1471-2164-9-248.

PMID:
18507836
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Structural profiles of human miRNA families from pairwise clustering.

Kaczkowski B, Torarinsson E, Reiche K, Havgaard JH, Stadler PF, Gorodkin J.

Bioinformatics. 2009 Feb 1;25(3):291-4. doi: 10.1093/bioinformatics/btn628. Epub 2008 Dec 4.

PMID:
19059941
[PubMed - indexed for MEDLINE]
Free Article
5.

Comparative genomic analysis reveals evolutionary characteristics and patterns of microRNA clusters in vertebrates.

Sun J, Gao B, Zhou M, Wang ZZ, Zhang F, Deng JE, Li X.

Gene. 2013 Jan 10;512(2):383-91. doi: 10.1016/j.gene.2012.09.102. Epub 2012 Oct 12.

PMID:
23063939
[PubMed - indexed for MEDLINE]
6.

A global analysis of evolutionary conservation among known and predicted gammaherpesvirus microRNAs.

Walz N, Christalla T, Tessmer U, Grundhoff A.

J Virol. 2010 Jan;84(2):716-28. doi: 10.1128/JVI.01302-09. Epub 2009 Nov 4.

PMID:
19889779
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Computational identification of novel microRNA homologs in the chimpanzee genome.

Baev V, Daskalova E, Minkov I.

Comput Biol Chem. 2009 Feb;33(1):62-70. doi: 10.1016/j.compbiolchem.2008.07.024. Epub 2008 Jul 26.

PMID:
18760970
[PubMed - indexed for MEDLINE]
8.

Repertoire and evolution of miRNA genes in four divergent nematode species.

de Wit E, Linsen SE, Cuppen E, Berezikov E.

Genome Res. 2009 Nov;19(11):2064-74. doi: 10.1101/gr.093781.109. Epub 2009 Sep 15.

PMID:
19755563
[PubMed - indexed for MEDLINE]
Free PMC Article
9.

Genome-wide survey of rice microRNAs and microRNA-target pairs in the root of a novel auxin-resistant mutant.

Meng Y, Huang F, Shi Q, Cao J, Chen D, Zhang J, Ni J, Wu P, Chen M.

Planta. 2009 Oct;230(5):883-98. doi: 10.1007/s00425-009-0994-3. Epub 2009 Aug 5.

PMID:
19655164
[PubMed - indexed for MEDLINE]
10.

Cross-mapping events in miRNAs reveal potential miRNA-mimics and evolutionary implications.

Guo L, Liang T, Gu W, Xu Y, Bai Y, Lu Z.

PLoS One. 2011;6(5):e20517. doi: 10.1371/journal.pone.0020517. Epub 2011 May 26.

PMID:
21637827
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Patterns of flanking sequence conservation and a characteristic upstream motif for microRNA gene identification.

Ohler U, Yekta S, Lim LP, Bartel DP, Burge CB.

RNA. 2004 Sep;10(9):1309-22.

PMID:
15317971
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Systematic analysis of genomic organization and heterogeneities of miRNA cluster in vertebrates.

Sun J, Liu HP, Deng JE, Zhou M.

Mol Biol Rep. 2012 May;39(5):5143-9. doi: 10.1007/s11033-011-1310-4. Epub 2011 Dec 11.

PMID:
22160431
[PubMed - indexed for MEDLINE]
13.

Genomic features and computational identification of human microRNAs under long-range developmental regulation.

Sheng Y, Previti C.

BMC Genomics. 2011 May 27;12:270. doi: 10.1186/1471-2164-12-270.

PMID:
21619633
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Genomic analysis of rice microRNA promoters and clusters.

Cui X, Xu SM, Mu DS, Yang ZM.

Gene. 2009 Feb 15;431(1-2):61-6. doi: 10.1016/j.gene.2008.11.016. Epub 2008 Nov 24.

PMID:
19073239
[PubMed - indexed for MEDLINE]
15.

Integrated evolutionary analysis of human miRNA gene clusters and families implicates evolutionary relationships.

Guo L, Zhao Y, Zhang H, Yang S, Chen F.

Gene. 2014 Jan 15;534(1):24-32. doi: 10.1016/j.gene.2013.10.037. Epub 2013 Oct 24.

PMID:
24161882
[PubMed - indexed for MEDLINE]
16.

Identification of clustered microRNAs using an ab initio prediction method.

Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M.

BMC Bioinformatics. 2005 Nov 7;6:267.

PMID:
16274478
[PubMed - indexed for MEDLINE]
Free PMC Article
17.

Origin and evolution of human microRNAs from transposable elements.

Piriyapongsa J, Mariño-Ramírez L, Jordan IK.

Genetics. 2007 Jun;176(2):1323-37. Epub 2007 Apr 15.

PMID:
17435244
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Computational identification and characterization of primate-specific microRNAs in human genome.

Lin S, Cheung WK, Chen S, Lu G, Wang Z, Xie D, Li K, Lin MC, Kung HF.

Comput Biol Chem. 2010 Aug;34(4):232-41. doi: 10.1016/j.compbiolchem.2010.08.001. Epub 2010 Aug 24.

PMID:
20863765
[PubMed - indexed for MEDLINE]
19.

Inference of miRNA targets using evolutionary conservation and pathway analysis.

Gaidatzis D, van Nimwegen E, Hausser J, Zavolan M.

BMC Bioinformatics. 2007 Mar 1;8:69. Erratum in: BMC Bioinformatics. 2007 Jul 12;8(1):248.

PMID:
17331257
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Human microRNA clusters: genomic organization and expression profile in leukemia cell lines.

Yu J, Wang F, Yang GH, Wang FL, Ma YN, Du ZW, Zhang JW.

Biochem Biophys Res Commun. 2006 Oct 13;349(1):59-68. Epub 2006 Aug 11.

PMID:
16934749
[PubMed - indexed for MEDLINE]

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