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Items: 1 to 20 of 165

1.

Structural and catalytic diversity within the amidohydrolase superfamily.

Seibert CM, Raushel FM.

Biochemistry. 2005 May 3;44(17):6383-91. Review.

PMID:
15850372
2.

Mechanism of the reaction catalyzed by isoaspartyl dipeptidase from Escherichia coli.

Martí-Arbona R, Fresquet V, Thoden JB, Davis ML, Holden HM, Raushel FM.

Biochemistry. 2005 May 17;44(19):7115-24.

PMID:
15882050
3.

Molecular structure of dihydroorotase: a paradigm for catalysis through the use of a binuclear metal center.

Thoden JB, Phillips GN Jr, Neal TM, Raushel FM, Holden HM.

Biochemistry. 2001 Jun 19;40(24):6989-97.

PMID:
11401542
4.

Crystal structure of N-carbamyl-D-amino acid amidohydrolase with a novel catalytic framework common to amidohydrolases.

Nakai T, Hasegawa T, Yamashita E, Yamamoto M, Kumasaka T, Ueki T, Nanba H, Ikenaka Y, Takahashi S, Sato M, Tsukihara T.

Structure. 2000 Jul 15;8(7):729-37.

5.

Structural diversity within the mononuclear and binuclear active sites of N-acetyl-D-glucosamine-6-phosphate deacetylase.

Hall RS, Brown S, Fedorov AA, Fedorov EV, Xu C, Babbitt PC, Almo SC, Raushel FM.

Biochemistry. 2007 Jul 10;46(27):7953-62. Epub 2007 Jun 13.

PMID:
17567048
6.

Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism.

Yoshimoto T, Tanaka N, Kanada N, Inoue T, Nakajima Y, Haratake M, Nakamura KT, Xu Y, Ito K.

J Mol Biol. 2004 Mar 19;337(2):399-416.

PMID:
15003455
7.

Crystal structure of metal-dependent allantoinase from Escherichia coli.

Kim K, Kim MI, Chung J, Ahn JH, Rhee S.

J Mol Biol. 2009 Apr 17;387(5):1067-74. doi: 10.1016/j.jmb.2009.02.041. Epub 2009 Feb 24.

PMID:
19248789
8.

Crystal structure of D-aminoacylase from Alcaligenes faecalis DA1. A novel subset of amidohydrolases and insights into the enzyme mechanism.

Liaw SH, Chen SJ, Ko TP, Hsu CS, Chen CJ, Wang AH, Tsai YC.

J Biol Chem. 2003 Feb 14;278(7):4957-62. Epub 2002 Nov 25.

9.

A catalytic mechanism revealed by the crystal structures of the imidazolonepropionase from Bacillus subtilis.

Yu Y, Liang YH, Brostromer E, Quan JM, Panjikar S, Dong YH, Su XD.

J Biol Chem. 2006 Dec 1;281(48):36929-36. Epub 2006 Sep 21.

10.

Functional annotation and three-dimensional structure of Dr0930 from Deinococcus radiodurans, a close relative of phosphotriesterase in the amidohydrolase superfamily.

Xiang DF, Kolb P, Fedorov AA, Meier MM, Fedorov LV, Nguyen TT, Sterner R, Almo SC, Shoichet BK, Raushel FM.

Biochemistry. 2009 Mar 17;48(10):2237-47. doi: 10.1021/bi802274f.

11.

Structure and catalytic mechanism of LigI: insight into the amidohydrolase enzymes of cog3618 and lignin degradation.

Hobbs ME, Malashkevich V, Williams HJ, Xu C, Sauder JM, Burley SK, Almo SC, Raushel FM.

Biochemistry. 2012 Apr 24;51(16):3497-507. doi: 10.1021/bi300307b. Epub 2012 Apr 9.

12.

In crystallo capture of a Michaelis complex and product-binding modes of a bacterial phosphotriesterase.

Jackson CJ, Foo JL, Kim HK, Carr PD, Liu JW, Salem G, Ollis DL.

J Mol Biol. 2008 Feb 1;375(5):1189-96. Epub 2007 Nov 1.

PMID:
18082180
13.

Structural analysis of a ternary complex of allantoate amidohydrolase from Escherichia coli reveals its mechanics.

Agarwal R, Burley SK, Swaminathan S.

J Mol Biol. 2007 Apr 27;368(2):450-63. Epub 2007 Feb 20.

PMID:
17362992
14.

The structure of L-hydantoinase from Arthobacter aurescens leads to an understanding of dihydropyrimidinase substrate and enantio specificity.

Abendroth J, Niefind K, May O, Siemann M, Syldatk C, Schomburg D.

Biochemistry. 2002 Jul 9;41(27):8589-97.

PMID:
12093275
15.

Mechanism for the hydrolysis of organophosphates by the bacterial phosphotriesterase.

Aubert SD, Li Y, Raushel FM.

Biochemistry. 2004 May 18;43(19):5707-15.

PMID:
15134445
16.

Functional characterization of an orphan cupin protein from Burkholderia xenovorans reveals a mononuclear nonheme Fe2+-dependent oxygenase that cleaves beta-diketones.

Leitgeb S, Straganz GD, Nidetzky B.

FEBS J. 2009 Oct;276(20):5983-97. doi: 10.1111/j.1742-4658.2009.07308.x. Epub 2009 Sep 15.

17.

Investigation of metal ion binding in phosphonoacetaldehyde hydrolase identifies sequence markers for metal-activated enzymes of the HAD enzyme superfamily.

Zhang G, Morais MC, Dai J, Zhang W, Dunaway-Mariano D, Allen KN.

Biochemistry. 2004 May 4;43(17):4990-7.

PMID:
15109258
18.

Functional identification of incorrectly annotated prolidases from the amidohydrolase superfamily of enzymes.

Xiang DF, Patskovsky Y, Xu C, Meyer AJ, Sauder JM, Burley SK, Almo SC, Raushel FM.

Biochemistry. 2009 May 5;48(17):3730-42. doi: 10.1021/bi900111q.

19.
20.

Logical identification of an allantoinase analog (puuE) recruited from polysaccharide deacetylases.

Ramazzina I, Cendron L, Folli C, Berni R, Monteverdi D, Zanotti G, Percudani R.

J Biol Chem. 2008 Aug 22;283(34):23295-304. doi: 10.1074/jbc.M801195200. Epub 2008 Jun 12.

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