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Items: 1 to 20 of 101

1.

Derivation of genetic interaction networks from quantitative phenotype data.

Drees BL, Thorsson V, Carter GW, Rives AW, Raymond MZ, Avila-Campillo I, Shannon P, Galitski T.

Genome Biol. 2005;6(4):R38. Epub 2005 Mar 31.

2.

Global mapping of the yeast genetic interaction network.

Tong AH, Lesage G, Bader GD, Ding H, Xu H, Xin X, Young J, Berriz GF, Brost RL, Chang M, Chen Y, Cheng X, Chua G, Friesen H, Goldberg DS, Haynes J, Humphries C, He G, Hussein S, Ke L, Krogan N, Li Z, Levinson JN, Lu H, Ménard P, Munyana C, Parsons AB, Ryan O, Tonikian R, Roberts T, Sdicu AM, Shapiro J, Sheikh B, Suter B, Wong SL, Zhang LV, Zhu H, Burd CG, Munro S, Sander C, Rine J, Greenblatt J, Peter M, Bretscher A, Bell G, Roth FP, Brown GW, Andrews B, Bussey H, Boone C.

Science. 2004 Feb 6;303(5659):808-13.

3.

The genetic landscape of a cell.

Costanzo M, Baryshnikova A, Bellay J, Kim Y, Spear ED, Sevier CS, Ding H, Koh JL, Toufighi K, Mostafavi S, Prinz J, St Onge RP, VanderSluis B, Makhnevych T, Vizeacoumar FJ, Alizadeh S, Bahr S, Brost RL, Chen Y, Cokol M, Deshpande R, Li Z, Lin ZY, Liang W, Marback M, Paw J, San Luis BJ, Shuteriqi E, Tong AH, van Dyk N, Wallace IM, Whitney JA, Weirauch MT, Zhong G, Zhu H, Houry WA, Brudno M, Ragibizadeh S, Papp B, Pál C, Roth FP, Giaever G, Nislow C, Troyanskaya OG, Bussey H, Bader GD, Gingras AC, Morris QD, Kim PM, Kaiser CA, Myers CL, Andrews BJ, Boone C.

Science. 2010 Jan 22;327(5964):425-31. doi: 10.1126/science.1180823.

4.

Prediction of phenotype and gene expression for combinations of mutations.

Carter GW, Prinz S, Neou C, Shelby JP, Marzolf B, Thorsson V, Galitski T.

Mol Syst Biol. 2007;3:96. Epub 2007 Mar 27.

5.

Protein complexes are central in the yeast genetic landscape.

Michaut M, Baryshnikova A, Costanzo M, Myers CL, Andrews BJ, Boone C, Bader GD.

PLoS Comput Biol. 2011 Feb;7(2):e1001092. doi: 10.1371/journal.pcbi.1001092. Epub 2011 Feb 24.

6.

Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiae interaction network.

Zhang LV, King OD, Wong SL, Goldberg DS, Tong AH, Lesage G, Andrews B, Bussey H, Boone C, Roth FP.

J Biol. 2005;4(2):6. Epub 2005 Jun 1.

7.

Synthetic genetic array (SGA) analysis in Saccharomyces cerevisiae and Schizosaccharomyces pombe.

Baryshnikova A, Costanzo M, Dixon S, Vizeacoumar FJ, Myers CL, Andrews B, Boone C.

Methods Enzymol. 2010;470:145-79. doi: 10.1016/S0076-6879(10)70007-0. Epub 2010 Mar 1.

PMID:
20946810
8.

Genetics of single-cell protein abundance variation in large yeast populations.

Albert FW, Treusch S, Shockley AH, Bloom JS, Kruglyak L.

Nature. 2014 Feb 27;506(7489):494-7. doi: 10.1038/nature12904. Epub 2014 Jan 8.

9.

Exploring genetic interactions and networks with yeast.

Boone C, Bussey H, Andrews BJ.

Nat Rev Genet. 2007 Jun;8(6):437-49. Review.

PMID:
17510664
10.

Genetics. Robust interactions.

Hartwell L.

Science. 2004 Feb 6;303(5659):774-5. No abstract available.

PMID:
14764857
11.

Saccharomyces Genome Database provides mutant phenotype data.

Engel SR, Balakrishnan R, Binkley G, Christie KR, Costanzo MC, Dwight SS, Fisk DG, Hirschman JE, Hitz BC, Hong EL, Krieger CJ, Livstone MS, Miyasato SR, Nash R, Oughtred R, Park J, Skrzypek MS, Weng S, Wong ED, Dolinski K, Botstein D, Cherry JM.

Nucleic Acids Res. 2010 Jan;38(Database issue):D433-6. doi: 10.1093/nar/gkp917. Epub 2009 Nov 11.

12.

Genetic characterization of rbt mutants that enhance basal transcription from core promoters in Saccharomyces cerevisiae.

Kunoh T, Sakuno T, Furukawa T, Kaneko Y, Harashima S.

J Biochem. 2000 Oct;128(4):575-84.

13.
14.

Wrestling with pleiotropy: genomic and topological analysis of the yeast gene expression network.

Featherstone DE, Broadie K.

Bioessays. 2002 Mar;24(3):267-74.

PMID:
11891763
15.

Experimental studies of deleterious mutation in Saccharomyces cerevisiae.

Korona R.

Res Microbiol. 2004 Jun;155(5):301-10. Review.

PMID:
15207861
16.

Synthetic genetic array analysis for global mapping of genetic networks in yeast.

Kuzmin E, Sharifpoor S, Baryshnikova A, Costanzo M, Myers CL, Andrews BJ, Boone C.

Methods Mol Biol. 2014;1205:143-68. doi: 10.1007/978-1-4939-1363-3_10.

PMID:
25213244
17.

Multiple genetic interaction experiments provide complementary information useful for gene function prediction.

Michaut M, Bader GD.

PLoS Comput Biol. 2012;8(6):e1002559. doi: 10.1371/journal.pcbi.1002559. Epub 2012 Jun 21.

18.

Multiple knockout analysis of genetic robustness in the yeast metabolic network.

Deutscher D, Meilijson I, Kupiec M, Ruppin E.

Nat Genet. 2006 Sep;38(9):993-8.

PMID:
16941010
19.
20.

The balance of weak and strong interactions in genetic networks.

Poyatos JF.

PLoS One. 2011 Feb 10;6(2):e14598. doi: 10.1371/journal.pone.0014598.

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