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Results: 1 to 20 of 70

1.

Enhancer sequence conservation between vertebrates is favoured in developmental regulator genes.

Plessy C, Dickmeis T, Chalmel F, Strähle U.

Trends Genet. 2005 Apr;21(4):207-10.

PMID:
15797614
[PubMed - indexed for MEDLINE]
2.

Cracking the genome's second code: enhancer detection by combined phylogenetic footprinting and transgenic fish and frog embryos.

Allende ML, Manzanares M, Tena JJ, Feijóo CG, Gómez-Skarmeta JL.

Methods. 2006 Jul;39(3):212-9.

PMID:
16806968
[PubMed - indexed for MEDLINE]
3.

Functional conservation of a forebrain enhancer from the elephant shark (Callorhinchus milii ) in zebrafish and mice.

MacDonald RB, Debiais-Thibaud M, Martin K, Poitras L, Tay BH, Venkatesh B, Ekker M.

BMC Evol Biol. 2010 May 26;10:157. doi: 10.1186/1471-2148-10-157.

PMID:
20504318
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Functionally conserved cis-regulatory elements of COL18A1 identified through zebrafish transgenesis.

Kague E, Bessling SL, Lee J, Hu G, Passos-Bueno MR, Fisher S.

Dev Biol. 2010 Jan 15;337(2):496-505. doi: 10.1016/j.ydbio.2009.10.028. Epub 2009 Nov 3.

PMID:
19895802
[PubMed - indexed for MEDLINE]
Free Article
5.

A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts.

de la Calle-Mustienes E, Feijóo CG, Manzanares M, Tena JJ, Rodríguez-Seguel E, Letizia A, Allende ML, Gómez-Skarmeta JL.

Genome Res. 2005 Aug;15(8):1061-72. Epub 2005 Jul 15.

PMID:
16024824
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Comparative functional genomics revealed conservation and diversification of three enhancers of the isl1 gene for motor and sensory neuron-specific expression.

Uemura O, Okada Y, Ando H, Guedj M, Higashijima S, Shimazaki T, Chino N, Okano H, Okamoto H.

Dev Biol. 2005 Feb 15;278(2):587-606.

PMID:
15680372
[PubMed - indexed for MEDLINE]
Free Article
7.

Comparative genomic analysis of vertebrate Hox3 and Hox4 genes.

Hadrys T, Prince V, Hunter M, Baker R, Rinkwitz S.

J Exp Zool B Mol Dev Evol. 2004 Mar 15;302(2):147-64.

PMID:
15054858
[PubMed - indexed for MEDLINE]
8.

Cis-regulatory characterization of sequence conservation surrounding the Hox4 genes.

Punnamoottil B, Herrmann C, Pascual-Anaya J, D'Aniello S, Garcia-Fernàndez J, Akalin A, Becker TS, Rinkwitz S.

Dev Biol. 2010 Apr 15;340(2):269-82. doi: 10.1016/j.ydbio.2010.01.035. Epub 2010 Feb 6.

PMID:
20144609
[PubMed - indexed for MEDLINE]
Free Article
9.

Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention.

Hufton AL, Mathia S, Braun H, Georgi U, Lehrach H, Vingron M, Poustka AJ, Panopoulou G.

Genome Res. 2009 Nov;19(11):2036-51. doi: 10.1101/gr.093237.109. Epub 2009 Aug 24.

PMID:
19704032
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Zebrafish enhancer detection (ZED) vector: a new tool to facilitate transgenesis and the functional analysis of cis-regulatory regions in zebrafish.

Bessa J, Tena JJ, de la Calle-Mustienes E, Fernández-Miñán A, Naranjo S, Fernández A, Montoliu L, Akalin A, Lenhard B, Casares F, Gómez-Skarmeta JL.

Dev Dyn. 2009 Sep;238(9):2409-17. doi: 10.1002/dvdy.22051.

PMID:
19653328
[PubMed - indexed for MEDLINE]
Free Article
11.

Transcriptional enhancers in protein-coding exons of vertebrate developmental genes.

Ritter DI, Dong Z, Guo S, Chuang JH.

PLoS One. 2012;7(5):e35202. doi: 10.1371/journal.pone.0035202. Epub 2012 May 2.

PMID:
22567096
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Conservation and diversity in the cis-regulatory networks that integrate information controlling expression of Hoxa2 in hindbrain and cranial neural crest cells in vertebrates.

Tümpel S, Maconochie M, Wiedemann LM, Krumlauf R.

Dev Biol. 2002 Jun 1;246(1):45-56. Review.

PMID:
12027433
[PubMed - indexed for MEDLINE]
Free Article
13.

Evolution of non-coding regulatory sequences involved in the developmental process: reflection of differential employment of paralogous genes as highlighted by Sox2 and group B1 Sox genes.

Kamachi Y, Iwafuchi M, Okuda Y, Takemoto T, Uchikawa M, Kondoh H.

Proc Jpn Acad Ser B Phys Biol Sci. 2009;85(2):55-68. Review.

PMID:
19212098
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

A systematic approach to identify functional motifs within vertebrate developmental enhancers.

Li Q, Ritter D, Yang N, Dong Z, Li H, Chuang JH, Guo S.

Dev Biol. 2010 Jan 15;337(2):484-95. doi: 10.1016/j.ydbio.2009.10.019. Epub 2009 Oct 20.

PMID:
19850031
[PubMed - indexed for MEDLINE]
Free PMC Article
15.

Conserved distances between vertebrate highly conserved elements.

Sun H, Skogerbø G, Chen R.

Hum Mol Genet. 2006 Oct 1;15(19):2911-22. Epub 2006 Aug 21.

PMID:
16923797
[PubMed - indexed for MEDLINE]
Free Article
16.

The words of the regulatory code are arranged in a variable manner in highly conserved enhancers.

Rastegar S, Hess I, Dickmeis T, Nicod JC, Ertzer R, Hadzhiev Y, Thies WG, Scherer G, Strähle U.

Dev Biol. 2008 Jun 15;318(2):366-77. doi: 10.1016/j.ydbio.2008.03.034. Epub 2008 Apr 4.

PMID:
18455719
[PubMed - indexed for MEDLINE]
Free Article
17.

In vivo enhancer analysis of human conserved non-coding sequences.

Pennacchio LA, Ahituv N, Moses AM, Prabhakar S, Nobrega MA, Shoukry M, Minovitsky S, Dubchak I, Holt A, Lewis KD, Plajzer-Frick I, Akiyama J, De Val S, Afzal V, Black BL, Couronne O, Eisen MB, Visel A, Rubin EM.

Nature. 2006 Nov 23;444(7118):499-502. Epub 2006 Nov 5.

PMID:
17086198
[PubMed - indexed for MEDLINE]
18.

Mosaic zebrafish transgenesis for evaluating enhancer sequences.

Kague E, Weber C, Fisher S.

J Vis Exp. 2010 Jul 16;(41). pii: 1722. doi: 10.3791/1722.

PMID:
20679998
[PubMed - indexed for MEDLINE]
Free PMC Article
19.

Cis-acting elements responsible for dopaminergic neuron-specific expression of zebrafish slc6a3 (dopamine transporter) in vivo are located remote from the transcriptional start site.

Bai Q, Burton EA.

Neuroscience. 2009 Dec 15;164(3):1138-51. doi: 10.1016/j.neuroscience.2009.09.014. Epub 2009 Sep 12.

PMID:
19755139
[PubMed - indexed for MEDLINE]
20.

Three enhancer regions regulate gbx2 gene expression in the isthmic region during zebrafish development.

Islam ME, Kikuta H, Inoue F, Kanai M, Kawakami A, Parvin MS, Takeda H, Yamasu K.

Mech Dev. 2006 Dec;123(12):907-24. Epub 2006 Aug 30.

PMID:
17067785
[PubMed - indexed for MEDLINE]
Free Article

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