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Items: 1 to 20 of 76

1.

Comparative interactomics.

Cesareni G, Ceol A, Gavrila C, Palazzi LM, Persico M, Schneider MV.

FEBS Lett. 2005 Mar 21;579(8):1828-33. Review.

2.

Increasing confidence of protein interactomes using network topological metrics.

Chen J, Hsu W, Lee ML, Ng SK.

Bioinformatics. 2006 Aug 15;22(16):1998-2004. Epub 2006 Jun 20.

3.

PRINCESS, a protein interaction confidence evaluation system with multiple data sources.

Li D, Liu W, Liu Z, Wang J, Liu Q, Zhu Y, He F.

Mol Cell Proteomics. 2008 Jun;7(6):1043-52. doi: 10.1074/mcp.M700287-MCP200. Epub 2008 Jan 29.

4.

Comparative interactomics: comparing apples and pears?

Kiemer L, Cesareni G.

Trends Biotechnol. 2007 Oct;25(10):448-54. Epub 2007 Sep 7. Review.

PMID:
17825444
5.

Ortholog-based protein-protein interaction prediction and its application to inter-species interactions.

Lee SA, Chan CH, Tsai CH, Lai JM, Wang FS, Kao CY, Huang CY.

BMC Bioinformatics. 2008 Dec 12;9 Suppl 12:S11. doi: 10.1186/1471-2105-9-S12-S11.

6.
7.

Charting plant interactomes: possibilities and challenges.

Morsy M, Gouthu S, Orchard S, Thorneycroft D, Harper JF, Mittler R, Cushman JC.

Trends Plant Sci. 2008 Apr;13(4):183-91. doi: 10.1016/j.tplants.2008.01.006. Epub 2008 Mar 7. Review.

PMID:
18329319
8.

Pushing structural information into the yeast interactome by high-throughput protein docking experiments.

Mosca R, Pons C, Fernández-Recio J, Aloy P.

PLoS Comput Biol. 2009 Aug;5(8):e1000490. doi: 10.1371/journal.pcbi.1000490. Epub 2009 Aug 28.

9.

Interaction networks: from protein functions to drug discovery. A review.

Chautard E, Thierry-Mieg N, Ricard-Blum S.

Pathol Biol (Paris). 2009 Jun;57(4):324-33. doi: 10.1016/j.patbio.2008.10.004. Epub 2008 Dec 13. Review.

PMID:
19070972
10.

Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map).

Park D, Lee S, Bolser D, Schroeder M, Lappe M, Oh D, Bhak J.

Bioinformatics. 2005 Aug 1;21(15):3234-40. Epub 2005 May 24.

11.

Interactome: gateway into systems biology.

Cusick ME, Klitgord N, Vidal M, Hill DE.

Hum Mol Genet. 2005 Oct 15;14 Spec No. 2:R171-81. Epub 2005 Sep 14. Review.

12.

Evolution versus "intelligent design": comparing the topology of protein-protein interaction networks to the Internet.

Yang Q, Siganos G, Faloutsos M, Lonardi S.

Comput Syst Bioinformatics Conf. 2006:299-310.

13.

Deducing topology of protein-protein interaction networks from experimentally measured sub-networks.

Yang L, Vondriska TM, Han Z, Maclellan WR, Weiss JN, Qu Z.

BMC Bioinformatics. 2008 Jul 3;9:301. doi: 10.1186/1471-2105-9-301.

14.

Chemical biology on PINs and NeeDLes.

Campbell-Valois FX, Michnick S.

Curr Opin Chem Biol. 2005 Feb;9(1):31-7. Review.

PMID:
15701450
15.

Bacteriome.org--an integrated protein interaction database for E. coli.

Su C, Peregrin-Alvarez JM, Butland G, Phanse S, Fong V, Emili A, Parkinson J.

Nucleic Acids Res. 2008 Jan;36(Database issue):D632-6. Epub 2007 Oct 16.

16.

Probabilistic prediction and ranking of human protein-protein interactions.

Scott MS, Barton GJ.

BMC Bioinformatics. 2007 Jul 5;8:239.

17.

Functional genomics and proteomics of the cellular osmotic stress response in 'non-model' organisms.

Kültz D, Fiol D, Valkova N, Gomez-Jimenez S, Chan SY, Lee J.

J Exp Biol. 2007 May;210(Pt 9):1593-601. Review.

18.

Protein evolution on a human signaling network.

Cui Q, Purisima EO, Wang E.

BMC Syst Biol. 2009 Feb 18;3:21. doi: 10.1186/1752-0509-3-21.

19.

Proteomics strategies for protein identification.

Resing KA, Ahn NG.

FEBS Lett. 2005 Feb 7;579(4):885-9. Review.

20.

A lock-and-key model for protein-protein interactions.

Morrison JL, Breitling R, Higham DJ, Gilbert DR.

Bioinformatics. 2006 Aug 15;22(16):2012-9. Epub 2006 Jun 20.

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