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Items: 1 to 20 of 131


Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping.

Roh TY, Cuddapah S, Zhao K.

Genes Dev. 2005 Mar 1;19(5):542-52. Epub 2005 Feb 10.


Transcription factor-dependent chromatin remodeling at heat shock and copper-responsive promoters in Chlamydomonas reinhardtii.

Strenkert D, Schmollinger S, Sommer F, Schulz-Raffelt M, Schroda M.

Plant Cell. 2011 Jun;23(6):2285-301. doi: 10.1105/tpc.111.085266. Epub 2011 Jun 24.


Genome-wide prediction of conserved and nonconserved enhancers by histone acetylation patterns.

Roh TY, Wei G, Farrell CM, Zhao K.

Genome Res. 2007 Jan;17(1):74-81. Epub 2006 Nov 29.


Epigenetic regulation of CIITA expression in human T-cells.

van Eggermond MC, Boom DR, Klous P, Schooten E, Marquez VE, Wierda RJ, Holling TM, van den Elsen PJ.

Biochem Pharmacol. 2011 Nov 15;82(10):1430-7. doi: 10.1016/j.bcp.2011.05.026. Epub 2011 Jun 2.


The genomic landscape of histone modifications in human T cells.

Roh TY, Cuddapah S, Cui K, Zhao K.

Proc Natl Acad Sci U S A. 2006 Oct 24;103(43):15782-7. Epub 2006 Oct 16.


Chromatin remodeling of interleukin-17 (IL-17)-IL-17F cytokine gene locus during inflammatory helper T cell differentiation.

Akimzhanov AM, Yang XO, Dong C.

J Biol Chem. 2007 Mar 2;282(9):5969-72. Epub 2007 Jan 11.


Tight associations between transcription promoter type and epigenetic variation in histone positioning and modification.

Nozaki T, Yachie N, Ogawa R, Kratz A, Saito R, Tomita M.

BMC Genomics. 2011 Aug 17;12:416. doi: 10.1186/1471-2164-12-416.


High-resolution, genome-wide mapping of chromatin modifications by GMAT.

Roh TY, Zhao K.

Methods Mol Biol. 2008;387:95-108.


Variant histone H3.3 marks promoters of transcriptionally active genes during mammalian cell division.

Chow CM, Georgiou A, Szutorisz H, Maia e Silva A, Pombo A, Barahona I, Dargelos E, Canzonetta C, Dillon N.

EMBO Rep. 2005 Apr;6(4):354-60.


H3K9 and H3K14 acetylation co-occur at many gene regulatory elements, while H3K14ac marks a subset of inactive inducible promoters in mouse embryonic stem cells.

Karmodiya K, Krebs AR, Oulad-Abdelghani M, Kimura H, Tora L.

BMC Genomics. 2012 Aug 24;13:424. doi: 10.1186/1471-2164-13-424.


Stress-dependent dynamics of global chromatin remodeling in yeast: dual role for SWI/SNF in the heat shock stress response.

Shivaswamy S, Iyer VR.

Mol Cell Biol. 2008 Apr;28(7):2221-34. doi: 10.1128/MCB.01659-07. Epub 2008 Jan 22.


Histone dynamics on the interleukin-2 gene in response to T-cell activation.

Chen X, Wang J, Woltring D, Gerondakis S, Shannon MF.

Mol Cell Biol. 2005 Apr;25(8):3209-19.


Genome-wide ChIP-seq mapping and analysis reveal butyrate-induced acetylation of H3K9 and H3K27 correlated with transcription activity in bovine cells.

Shin JH, Li RW, Gao Y, Baldwin R 6th, Li CJ.

Funct Integr Genomics. 2012 Mar;12(1):119-30. doi: 10.1007/s10142-012-0263-6. Epub 2012 Jan 17.


CpG island mapping by epigenome prediction.

Bock C, Walter J, Paulsen M, Lengauer T.

PLoS Comput Biol. 2007 Jun;3(6):e110. Epub 2007 May 2.


Role of histone modifications in marking and activating genes through mitosis.

Valls E, Sánchez-Molina S, Martínez-Balbás MA.

J Biol Chem. 2005 Dec 30;280(52):42592-600. Epub 2005 Sep 30.


The mammalian epigenome.

Bernstein BE, Meissner A, Lander ES.

Cell. 2007 Feb 23;128(4):669-81. Review.


Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity.

Coolen MW, Stirzaker C, Song JZ, Statham AL, Kassir Z, Moreno CS, Young AN, Varma V, Speed TP, Cowley M, Lacaze P, Kaplan W, Robinson MD, Clark SJ.

Nat Cell Biol. 2010 Mar;12(3):235-46. doi: 10.1038/ncb2023. Epub 2010 Feb 21.


Lineage-specific DNA methylation in T cells correlates with histone methylation and enhancer activity.

Schmidl C, Klug M, Boeld TJ, Andreesen R, Hoffmann P, Edinger M, Rehli M.

Genome Res. 2009 Jul;19(7):1165-74. doi: 10.1101/gr.091470.109. Epub 2009 Jun 3.


Histone acetylation and chromatin signature in stem cell identity and cancer.

Shukla V, Vaissière T, Herceg Z.

Mutat Res. 2008 Jan 1;637(1-2):1-15. Epub 2007 Aug 1. Review.

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