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Similar articles for PubMed (Select 15608380)

1.

Protein imperfections: separating intrinsic from extrinsic variation of torsion angles.

Butterfoss GL, Richardson JS, Hermans J.

Acta Crystallogr D Biol Crystallogr. 2005 Jan;61(Pt 1):88-98. Epub 2004 Dec 17.

PMID:
15608380
2.

Rotamers: to be or not to be? An analysis of amino acid side-chain conformations in globular proteins.

Schrauber H, Eisenhaber F, Argos P.

J Mol Biol. 1993 Mar 20;230(2):592-612.

PMID:
8464066
3.
4.
5.

Chi1 torsion angle dynamics in proteins from dipolar couplings.

Mittermaier A, Kay LE.

J Am Chem Soc. 2001 Jul 18;123(28):6892-903.

PMID:
11448195
7.

A new force field (ECEPP-05) for peptides, proteins, and organic molecules.

Arnautova YA, Jagielska A, Scheraga HA.

J Phys Chem B. 2006 Mar 16;110(10):5025-44.

PMID:
16526746
8.
9.

Visualizing and quantifying molecular goodness-of-fit: small-probe contact dots with explicit hydrogen atoms.

Word JM, Lovell SC, LaBean TH, Taylor HC, Zalis ME, Presley BK, Richardson JS, Richardson DC.

J Mol Biol. 1999 Jan 29;285(4):1711-33.

PMID:
9917407
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11.
12.

Side-chain conformation angles of amino acids: effect of temperature factor cut-off.

Ramya Bhargavi G, Sheik SS, Velmurugan D, Sekar K.

J Struct Biol. 2003 Sep;143(3):181-4.

PMID:
14572473
13.

Statistical analysis of crystallographic data obtained from squid ganglion DFPase at 0.85 A resolution.

Koepke J, Scharff EI, Lücke C, Rüterjans H, Fritzsch G.

Acta Crystallogr D Biol Crystallogr. 2003 Oct;59(Pt 10):1744-54. Epub 2003 Sep 19.

PMID:
14501113
14.
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16.

Boltzmann-type distribution of side-chain conformation in proteins.

Butterfoss GL, Hermans J.

Protein Sci. 2003 Dec;12(12):2719-31.

17.

Statistically based reduced representation of amino acid side chains.

Rainey JK, Goh MC.

J Chem Inf Comput Sci. 2004 May-Jun;44(3):817-30.

PMID:
15154746
18.

[Can the local energy minimization refine the PDB structures of different resolution universally?].

Godzi MG, Gromova AP, Oferkin IV, Mironov PV.

Biofizika. 2009 Jul-Aug;54(4):622-9. Russian.

PMID:
19795782
20.

Prediction of protein side-chain rotamers from a backbone-dependent rotamer library: a new homology modeling tool.

Bower MJ, Cohen FE, Dunbrack RL Jr.

J Mol Biol. 1997 Apr 18;267(5):1268-82.

PMID:
9150411
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