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Results: 1 to 20 of 93

1.
2.

The discovery of single-nucleotide polymorphisms--and inferences about human demographic history.

Wakeley J, Nielsen R, Liu-Cordero SN, Ardlie K.

Am J Hum Genet. 2001 Dec;69(6):1332-47. Epub 2001 Nov 6.

PMID:
11704929
[PubMed - indexed for MEDLINE]
Free PMC Article
3.
4.

Composite likelihood estimation of demographic parameters.

Garrigan D.

BMC Genet. 2009 Nov 12;10:72. doi: 10.1186/1471-2156-10-72.

PMID:
19909534
[PubMed - indexed for MEDLINE]
Free PMC Article
5.

Usefulness of single nucleotide polymorphism data for estimating population parameters.

Kuhner MK, Beerli P, Yamato J, Felsenstein J.

Genetics. 2000 Sep;156(1):439-47.

PMID:
10978306
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Likelihood analysis of ongoing gene flow and historical association.

Nielsen R, Slatkin M.

Evolution. 2000 Feb;54(1):44-50.

PMID:
10937182
[PubMed - indexed for MEDLINE]
7.

The effect of recent admixture on inference of ancient human population history.

Lohmueller KE, Bustamante CD, Clark AG.

Genetics. 2010 Jun;185(2):611-22. doi: 10.1534/genetics.109.113761. Epub 2010 Apr 9.

PMID:
20382834
[PubMed - indexed for MEDLINE]
Free PMC Article
8.

Estimating relative population sizes from simulated data sets and the question of greater African effective size.

Eller E.

Am J Phys Anthropol. 2001 Sep;116(1):1-12.

PMID:
11536112
[PubMed - indexed for MEDLINE]
9.

Accurate haplotype inference for multiple linked single-nucleotide polymorphisms using sibship data.

Liu PY, Lu Y, Deng HW.

Genetics. 2006 Sep;174(1):499-509. Epub 2006 Jun 18.

PMID:
16783022
[PubMed - indexed for MEDLINE]
Free PMC Article
10.

Estimating population genetic parameters and comparing model goodness-of-fit using DNA sequences with error.

Liu X, Fu YX, Maxwell TJ, Boerwinkle E.

Genome Res. 2010 Jan;20(1):101-9. doi: 10.1101/gr.097543.109. Epub 2009 Dec 1.

PMID:
19952140
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

Maximum likelihood estimation of population divergence times and population phylogenies under the infinite sites model.

Nielsen R.

Theor Popul Biol. 1998 Apr;53(2):143-51.

PMID:
9615473
[PubMed - indexed for MEDLINE]
12.

Assessment and management of single nucleotide polymorphism genotype errors in genetic association analysis.

Gordon D, Ott J.

Pac Symp Biocomput. 2001:18-29.

PMID:
11262939
[PubMed - indexed for MEDLINE]
13.

Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data.

Gutenkunst RN, Hernandez RD, Williamson SH, Bustamante CD.

PLoS Genet. 2009 Oct;5(10):e1000695. doi: 10.1371/journal.pgen.1000695. Epub 2009 Oct 23.

PMID:
19851460
[PubMed - indexed for MEDLINE]
Free PMC Article
14.

Estimators of the local false discovery rate designed for small numbers of tests.

Padilla M, Bickel DR.

Stat Appl Genet Mol Biol. 2012 Oct 12;11(5):4. doi: 10.1515/1544-6115.1807.

PMID:
23079518
[PubMed - indexed for MEDLINE]
15.

Estimating population divergence time and phylogeny from single-nucleotide polymorphisms data with outgroup ascertainment bias.

Wang Y, Nielsen R.

Mol Ecol. 2012 Feb;21(4):974-86. doi: 10.1111/j.1365-294X.2011.05413.x. Epub 2011 Dec 29.

PMID:
22211450
[PubMed - indexed for MEDLINE]
Free PMC Article
16.
17.

Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes.

Voight BF, Adams AM, Frisse LA, Qian Y, Hudson RR, Di Rienzo A.

Proc Natl Acad Sci U S A. 2005 Dec 20;102(51):18508-13. Epub 2005 Dec 13.

PMID:
16352722
[PubMed - indexed for MEDLINE]
Free PMC Article
18.
19.

Methods for human demographic inference using haplotype patterns from genomewide single-nucleotide polymorphism data.

Lohmueller KE, Bustamante CD, Clark AG.

Genetics. 2009 May;182(1):217-31. doi: 10.1534/genetics.108.099275. Epub 2009 Mar 2.

PMID:
19255370
[PubMed - indexed for MEDLINE]
Free PMC Article
20.

Reconstituting the frequency spectrum of ascertained single-nucleotide polymorphism data.

Nielsen R, Hubisz MJ, Clark AG.

Genetics. 2004 Dec;168(4):2373-82. Epub 2004 Sep 15.

PMID:
15371362
[PubMed - indexed for MEDLINE]
Free PMC Article

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