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Items: 1 to 20 of 107

1.
2.

The mutual information: detecting and evaluating dependencies between variables.

Steuer R, Kurths J, Daub CO, Weise J, Selbig J.

Bioinformatics. 2002;18 Suppl 2:S231-40.

3.

Effect of data normalization on fuzzy clustering of DNA microarray data.

Kim SY, Lee JW, Bae JS.

BMC Bioinformatics. 2006 Mar 14;7:134.

4.

TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach.

Zoppoli P, Morganella S, Ceccarelli M.

BMC Bioinformatics. 2010 Mar 25;11:154. doi: 10.1186/1471-2105-11-154.

5.

Fuzzy-rough sets for information measures and selection of relevant genes from microarray data.

Maji P, Pal SK.

IEEE Trans Syst Man Cybern B Cybern. 2010 Jun;40(3):741-52. doi: 10.1109/TSMCB.2009.2028433. Epub 2009 Nov 3.

PMID:
19887323
7.

Evaluation of gene-expression clustering via mutual information distance measure.

Priness I, Maimon O, Ben-Gal I.

BMC Bioinformatics. 2007 Mar 30;8:111.

8.

Fast calculation of pairwise mutual information for gene regulatory network reconstruction.

Qiu P, Gentles AJ, Plevritis SK.

Comput Methods Programs Biomed. 2009 May;94(2):177-80. doi: 10.1016/j.cmpb.2008.11.003. Epub 2009 Jan 22.

PMID:
19167129
9.

Query large scale microarray compendium datasets using a model-based bayesian approach with variable selection.

Hu M, Qin ZS.

PLoS One. 2009;4(2):e4495. doi: 10.1371/journal.pone.0004495. Epub 2009 Feb 13.

10.

Comparison of co-expression measures: mutual information, correlation, and model based indices.

Song L, Langfelder P, Horvath S.

BMC Bioinformatics. 2012 Dec 9;13:328. doi: 10.1186/1471-2105-13-328.

11.

Fuzzy J-Means and VNS methods for clustering genes from microarray data.

Belacel N, Cuperlović-Culf M, Laflamme M, Ouellette R.

Bioinformatics. 2004 Jul 22;20(11):1690-701. Epub 2004 Feb 26.

12.

An information theoretic approach for analyzing temporal patterns of gene expression.

Kasturi J, Acharya R, Ramanathan M.

Bioinformatics. 2003 Mar 1;19(4):449-58.

13.
15.
16.

Clustering short time series gene expression data.

Ernst J, Nau GJ, Bar-Joseph Z.

Bioinformatics. 2005 Jun;21 Suppl 1:i159-68.

17.

Validation of differential gene expression algorithms: application comparing fold-change estimation to hypothesis testing.

Yanofsky CM, Bickel DR.

BMC Bioinformatics. 2010 Jan 28;11:63. doi: 10.1186/1471-2105-11-63.

18.

Fuzzy logic for elimination of redundant information of microarray data.

Huerta EB, Duval B, Hao JK.

Genomics Proteomics Bioinformatics. 2008 Jun;6(2):61-73. doi: 10.1016/S1672-0229(08)60021-2.

19.

Microarray data clustering based on temporal variation: FCV with TSD preclustering.

Möller-Levet CS, Cho KH, Wolkenhauer O.

Appl Bioinformatics. 2003;2(1):35-45.

PMID:
15130832
20.

ARACNE: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context.

Margolin AA, Nemenman I, Basso K, Wiggins C, Stolovitzky G, Dalla Favera R, Califano A.

BMC Bioinformatics. 2006 Mar 20;7 Suppl 1:S7.

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