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Results: 1 to 20 of 88

1.

Protein motions promote catalysis.

Tousignant A, Pelletier JN.

Chem Biol. 2004 Aug;11(8):1037-42. Review.

PMID:
15324804
[PubMed - indexed for MEDLINE]
2.

Enzyme catalysis: not different, just better.

Knowles JR.

Nature. 1991 Mar 14;350(6314):121-4. Review.

PMID:
2005961
[PubMed - indexed for MEDLINE]
3.

NMR investigation of Tyr105 mutants in TEM-1 beta-lactamase: dynamics are correlated with function.

Doucet N, Savard PY, Pelletier JN, Gagné SM.

J Biol Chem. 2007 Jul 20;282(29):21448-59. Epub 2007 Apr 10.

PMID:
17426035
[PubMed - indexed for MEDLINE]
Free Article
4.

Solution NMR and computer simulation studies of active site loop motion in triosephosphate isomerase.

Massi F, Wang C, Palmer AG 3rd.

Biochemistry. 2006 Sep 12;45(36):10787-94. Erratum in: Biochemistry. 2006 Nov 28;45(47):14232.

PMID:
16953564
[PubMed - indexed for MEDLINE]
5.

The time scale of the catalytic loop motion in triosephosphate isomerase.

Rozovsky S, McDermott AE.

J Mol Biol. 2001 Jun 29;310(1):259-70.

PMID:
11419951
[PubMed - indexed for MEDLINE]
6.

Evolutionarily conserved linkage between enzyme fold, flexibility, and catalysis.

Ramanathan A, Agarwal PK.

PLoS Biol. 2011 Nov;9(11):e1001193. doi: 10.1371/journal.pbio.1001193. Epub 2011 Nov 8.

PMID:
22087074
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

Role of protein dynamics in reaction rate enhancement by enzymes.

Agarwal PK.

J Am Chem Soc. 2005 Nov 2;127(43):15248-56.

PMID:
16248667
[PubMed - indexed for MEDLINE]
8.

Value of a hydrogen bond in triosephosphate isomerase loop motion.

Berlow RB, Igumenova TI, Loria JP.

Biochemistry. 2007 May 22;46(20):6001-10. Epub 2007 Apr 25.

PMID:
17455914
[PubMed - indexed for MEDLINE]
9.

Intrinsic dynamics of an enzyme underlies catalysis.

Eisenmesser EZ, Millet O, Labeikovsky W, Korzhnev DM, Wolf-Watz M, Bosco DA, Skalicky JJ, Kay LE, Kern D.

Nature. 2005 Nov 3;438(7064):117-21.

PMID:
16267559
[PubMed - indexed for MEDLINE]
10.

Structure and dynamics of CTX-M enzymes reveal insights into substrate accommodation by extended-spectrum beta-lactamases.

Delmas J, Chen Y, Prati F, Robin F, Shoichet BK, Bonnet R.

J Mol Biol. 2008 Jan 4;375(1):192-201. Epub 2007 Oct 16.

PMID:
17999931
[PubMed - indexed for MEDLINE]
11.

Hydroxyl groups in the betabeta sandwich of metallo-beta-lactamases favor enzyme activity: Tyr218 and Ser262 pull down the lid.

Oelschlaeger P, Pleiss J.

J Mol Biol. 2007 Feb 9;366(1):316-29. Epub 2006 Nov 11.

PMID:
17157873
[PubMed - indexed for MEDLINE]
12.

Disulfide bridges in the mesophilic triosephosphate isomerase from Giardia lamblia are related to oligomerization and activity.

Reyes-Vivas H, Diaz A, Peon J, Mendoza-Hernandez G, Hernandez-Alcantara G, De la Mora-De la Mora I, Enriquez-Flores S, Dominguez-Ramirez L, Lopez-Velazquez G.

J Mol Biol. 2007 Jan 19;365(3):752-63. Epub 2006 Oct 21.

PMID:
17095008
[PubMed - indexed for MEDLINE]
13.

A novel method for enzyme design.

Zhu X, Lai L.

J Comput Chem. 2009 Jan 30;30(2):256-67. doi: 10.1002/jcc.21050.

PMID:
18615422
[PubMed - indexed for MEDLINE]
14.

Structural effects of a dimer interface mutation on catalytic activity of triosephosphate isomerase. The role of conserved residues and complementary mutations.

Banerjee M, Balaram H, Balaram P.

FEBS J. 2009 Aug;276(15):4169-83. doi: 10.1111/j.1742-4658.2009.07126.x. Epub 2009 Jul 3.

PMID:
19583769
[PubMed - indexed for MEDLINE]
15.

Coupling of structural fluctuations to deamidation reaction in triosephosphate isomerase by Gaussian network model.

Konuklar FA, Aviyente V, Haliloğlu T.

Proteins. 2006 Mar 15;62(3):715-27.

PMID:
16323206
[PubMed - indexed for MEDLINE]
16.

Molecular dynamics study of triosephosphate isomerase from Trypanosoma cruzi in water/decane mixtures.

Díaz-Vergara N, Piñeiro A.

J Phys Chem B. 2008 Mar 20;112(11):3529-39. doi: 10.1021/jp7102275. Epub 2008 Feb 27.

PMID:
18302363
[PubMed - indexed for MEDLINE]
17.

Insight into catalytically relevant correlated motions in human purine nucleoside phosphorylase.

Núñez S, Wing C, Antoniou D, Schramm VL, Schwartz SD.

J Phys Chem A. 2006 Jan 19;110(2):463-72.

PMID:
16405318
[PubMed - indexed for MEDLINE]
18.

Dimerization affects collective dynamics of triosephosphate isomerase.

Cansu S, Doruker P.

Biochemistry. 2008 Feb 5;47(5):1358-68. doi: 10.1021/bi701916b. Epub 2008 Jan 12.

PMID:
18189421
[PubMed - indexed for MEDLINE]
19.

Subunit interactions and catalytic activity of triose phosphate isomerase.

Branford White CJ, Fell DA.

Enzyme. 1982;28(4):287-93.

PMID:
7151772
[PubMed - indexed for MEDLINE]
20.

Backbone dynamics of TEM-1 determined by NMR: evidence for a highly ordered protein.

Savard PY, Gagné SM.

Biochemistry. 2006 Sep 26;45(38):11414-24.

PMID:
16981701
[PubMed - indexed for MEDLINE]
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