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Results: 1 to 20 of 218

1.

Substitution of aspartic acid with glutamic acid increases the unfolding transition temperature of a protein.

Lee DY, Kim KA, Yu YG, Kim KS.

Biochem Biophys Res Commun. 2004 Jul 30;320(3):900-6.

PMID:
15240133
[PubMed - indexed for MEDLINE]
2.

Stabilization of apoflavodoxin by replacing hydrogen-bonded charged Asp or Glu residues by the neutral isosteric Asn or Gln.

Irún MP, Maldonado S, Sancho J.

Protein Eng. 2001 Mar;14(3):173-81.

PMID:
11342714
[PubMed - indexed for MEDLINE]
Free Article
3.

Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.

Haney PJ, Badger JH, Buldak GL, Reich CI, Woese CR, Olsen GJ.

Proc Natl Acad Sci U S A. 1999 Mar 30;96(7):3578-83.

PMID:
10097079
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Aspartic acid 405 contributes to the substrate specificity of aminopeptidase B.

Fukasawa KM, Hirose J, Hata T, Ono Y.

Biochemistry. 2006 Sep 26;45(38):11425-31.

PMID:
16981702
[PubMed - indexed for MEDLINE]
5.

Role of charged residues in stabilization of Pyrococcus horikoshii CutA1, which has a denaturation temperature of nearly 150 °C.

Matsuura Y, Takehira M, Sawano M, Ogasahara K, Tanaka T, Yamamoto H, Kunishima N, Katoh E, Yutani K.

FEBS J. 2012 Jan;279(1):78-90. doi: 10.1111/j.1742-4658.2011.08400.x. Epub 2011 Nov 14.

PMID:
22008518
[PubMed - indexed for MEDLINE]
6.

Conservation of amino acids in multiple alignments: aspartic acid has unexpected conservation.

Fiser A, Simon I, Barton GJ.

FEBS Lett. 1996 Nov 18;397(2-3):225-9.

PMID:
8955352
[PubMed - indexed for MEDLINE]
7.

The role of acidic amino acid residues in the structural stability of snake cardiotoxins.

Chiang CM, Chang SL, Lin HJ, Wu WG.

Biochemistry. 1996 Jul 16;35(28):9177-86.

PMID:
8703923
[PubMed - indexed for MEDLINE]
8.

Identification of critical residues of choline kinase A2 from Caenorhabditis elegans.

Yuan C, Kent C.

J Biol Chem. 2004 Apr 23;279(17):17801-9. Epub 2004 Feb 11.

PMID:
14960577
[PubMed - indexed for MEDLINE]
Free Article
9.

Reversal of negative charges on the surface of Escherichia coli thioredoxin: pockets versus protrusions.

Mancusso R, Cruz E, Cataldi M, Mendoza C, Fuchs J, Wang H, Yang X, Tasayco ML.

Biochemistry. 2004 Apr 6;43(13):3835-43.

PMID:
15049690
[PubMed - indexed for MEDLINE]
10.

The pH-dependence of amide chemical shift of Asp/Glu reflects its pKa in intrinsically disordered proteins with only local interactions.

Pujato M, Navarro A, Versace R, Mancusso R, Ghose R, Tasayco ML.

Biochim Biophys Acta. 2006 Jul;1764(7):1227-33. Epub 2006 May 13.

PMID:
16787768
[PubMed - indexed for MEDLINE]
Free Article
11.

Specific amino acid recognition by aspartyl-tRNA synthetase studied by free energy simulations.

Archontis G, Simonson T, Moras D, Karplus M.

J Mol Biol. 1998 Feb 6;275(5):823-46.

PMID:
9480772
[PubMed - indexed for MEDLINE]
12.

Asp(344) and Thr(345) are critical for cation exchange mediated by NhaD, Na(+)/H(+) antiporter of Vibrio cholerae.

Ostroumov E, Dzioba J, Loewen PC, Dibrov P.

Biochim Biophys Acta. 2002 Aug 19;1564(1):99-106.

PMID:
12101001
[PubMed - indexed for MEDLINE]
Free Article
13.

Thermodynamic effects of proline introduction on protein stability.

Prajapati RS, Das M, Sreeramulu S, Sirajuddin M, Srinivasan S, Krishnamurthy V, Ranjani R, Ramakrishnan C, Varadarajan R.

Proteins. 2007 Feb 1;66(2):480-91.

PMID:
17034035
[PubMed - indexed for MEDLINE]
14.

Stabilization of a fibronectin type III domain by the removal of unfavorable electrostatic interactions on the protein surface.

Koide A, Jordan MR, Horner SR, Batori V, Koide S.

Biochemistry. 2001 Aug 28;40(34):10326-33.

PMID:
11513611
[PubMed - indexed for MEDLINE]
15.

Structural and biochemical exploration of a critical amino acid in human 8-oxoguanine glycosylase.

Norman DP, Chung SJ, Verdine GL.

Biochemistry. 2003 Feb 18;42(6):1564-72.

PMID:
12578369
[PubMed - indexed for MEDLINE]
16.

Natural selection for kinetic stability is a likely origin of correlations between mutational effects on protein energetics and frequencies of amino acid occurrences in sequence alignments.

Godoy-Ruiz R, Ariza F, Rodriguez-Larrea D, Perez-Jimenez R, Ibarra-Molero B, Sanchez-Ruiz JM.

J Mol Biol. 2006 Oct 6;362(5):966-78. Epub 2006 Jul 31.

PMID:
16935299
[PubMed - indexed for MEDLINE]
17.

The negative charge of Glu-127 in protein kinase A and its biorecognition.

Batkin M, Shaltiel S.

FEBS Lett. 1999 Jun 11;452(3):395-9.

PMID:
10386628
[PubMed - indexed for MEDLINE]
Free Article
18.

Protein thermostability: structure-based difference of amino acid between thermophilic and mesophilic proteins.

Pack SP, Yoo YJ.

J Biotechnol. 2004 Aug 5;111(3):269-77.

PMID:
15246663
[PubMed - indexed for MEDLINE]
19.
20.

Amino acids of the bacterial toxin SopE involved in G nucleotide exchange on Cdc42.

Schlumberger MC, Friebel A, Buchwald G, Scheffzek K, Wittinghofer A, Hardt WD.

J Biol Chem. 2003 Jul 18;278(29):27149-59. Epub 2003 Apr 28.

PMID:
12719429
[PubMed - indexed for MEDLINE]
Free Article

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