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Items: 1 to 20 of 205

1.

Prediction of mammalian microRNA targets.

Lewis BP, Shih IH, Jones-Rhoades MW, Bartel DP, Burge CB.

Cell. 2003 Dec 26;115(7):787-98.

2.
3.

A guide through present computational approaches for the identification of mammalian microRNA targets.

Sethupathy P, Megraw M, Hatzigeorgiou AG.

Nat Methods. 2006 Nov;3(11):881-6.

PMID:
17060911
4.

Computational analysis of microRNA targets in Caenorhabditis elegans.

Watanabe Y, Yachie N, Numata K, Saito R, Kanai A, Tomita M.

Gene. 2006 Jan 3;365:2-10. Epub 2005 Dec 13.

PMID:
16356665
5.

Computational prediction and experimental validation of evolutionarily conserved microRNA target genes in bilaterian animals.

Takane K, Fujishima K, Watanabe Y, Sato A, Saito N, Tomita M, Kanai A.

BMC Genomics. 2010 Feb 9;11:101. doi: 10.1186/1471-2164-11-101.

6.

Same computational analysis, different miRNA target predictions.

Xu X.

Nat Methods. 2007 Mar;4(3):191; author reply 191. No abstract available.

PMID:
17327844
7.

New class of microRNA targets containing simultaneous 5'-UTR and 3'-UTR interaction sites.

Lee I, Ajay SS, Yook JI, Kim HS, Hong SH, Kim NH, Dhanasekaran SM, Chinnaiyan AM, Athey BD.

Genome Res. 2009 Jul;19(7):1175-83. doi: 10.1101/gr.089367.108. Epub 2009 Mar 31.

8.

The relationship between the evolution of microRNA targets and the length of their UTRs.

Cheng C, Bhardwaj N, Gerstein M.

BMC Genomics. 2009 Sep 14;10:431. doi: 10.1186/1471-2164-10-431.

9.

MicroRNA-directed cleavage of HOXB8 mRNA.

Yekta S, Shih IH, Bartel DP.

Science. 2004 Apr 23;304(5670):594-6.

10.

Small but influential: the role of microRNAs on gene regulatory network and 3'UTR evolution.

Zhang R, Su B.

J Genet Genomics. 2009 Jan;36(1):1-6. doi: 10.1016/S1673-8527(09)60001-1. Review.

PMID:
19161940
11.

Prediction of microRNA targets.

Mazière P, Enright AJ.

Drug Discov Today. 2007 Jun;12(11-12):452-8. Epub 2007 Apr 26. Review.

PMID:
17532529
12.

microRNA target predictions in animals.

Rajewsky N.

Nat Genet. 2006 Jun;38 Suppl:S8-13. Review.

PMID:
16736023
13.

A genome-wide map of conserved microRNA targets in C. elegans.

Lall S, Grün D, Krek A, Chen K, Wang YL, Dewey CN, Sood P, Colombo T, Bray N, Macmenamin P, Kao HL, Gunsalus KC, Pachter L, Piano F, Rajewsky N.

Curr Biol. 2006 Mar 7;16(5):460-71. Epub 2006 Feb 2.

14.

Global gene expression analysis reveals reduced abundance of putative microRNA targets in human prostate tumours.

Sun R, Fu X, Li Y, Xie Y, Mao Y.

BMC Genomics. 2009 Feb 26;10:93. doi: 10.1186/1471-2164-10-93.

15.

Prediction of regulatory modules comprising microRNAs and target genes.

Yoon S, De Micheli G.

Bioinformatics. 2005 Sep 1;21 Suppl 2:ii93-100.

16.

Predicting the fate of microRNA target genes based on sequence features.

Pei Y, Wang X, Zhang X.

J Theor Biol. 2009 Nov 7;261(1):17-22. doi: 10.1016/j.jtbi.2009.07.022. Epub 2009 Jul 28.

PMID:
19643113
17.

Principles of microRNA-target recognition.

Brennecke J, Stark A, Russell RB, Cohen SM.

PLoS Biol. 2005 Mar;3(3):e85.

18.

Inter- and intra-combinatorial regulation by transcription factors and microRNAs.

Zhou Y, Ferguson J, Chang JT, Kluger Y.

BMC Genomics. 2007 Oct 30;8:396.

19.

Computational methods for microRNA target prediction.

Watanabe Y, Tomita M, Kanai A.

Methods Enzymol. 2007;427:65-86. Review.

PMID:
17720479
20.

Human MicroRNA targets.

John B, Enright AJ, Aravin A, Tuschl T, Sander C, Marks DS.

PLoS Biol. 2004 Nov;2(11):e363. Epub 2004 Oct 5. Erratum in: PLoS Biol. 2005 Jul;3(7):e264.

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