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Results: 1 to 20 of 98

Related Citations for PubMed (Select 14530388)

1.

Structure and function of the feed-forward loop network motif.

Mangan S, Alon U.

Proc Natl Acad Sci U S A. 2003 Oct 14;100(21):11980-5. Epub 2003 Oct 6.

2.

Noise characteristics of feed forward loops.

Ghosh B, Karmakar R, Bose I.

Phys Biol. 2005 Mar;2(1):36-45.

PMID:
16204855
3.

The incoherent feed-forward loop accelerates the response-time of the gal system of Escherichia coli.

Mangan S, Itzkovitz S, Zaslaver A, Alon U.

J Mol Biol. 2006 Mar 10;356(5):1073-81. Epub 2005 Dec 19.

PMID:
16406067
4.

Environmental selection of the feed-forward loop circuit in gene-regulation networks.

Dekel E, Mangan S, Alon U.

Phys Biol. 2005 Jun;2(2):81-8.

PMID:
16204860
5.

A coherent feed-forward loop with a SUM input function prolongs flagella expression in Escherichia coli.

Kalir S, Mangan S, Alon U.

Mol Syst Biol. 2005;1:2005.0006. Epub 2005 Mar 29.

6.

The incoherent feed-forward loop can generate non-monotonic input functions for genes.

Kaplan S, Bren A, Dekel E, Alon U.

Mol Syst Biol. 2008;4:203. doi: 10.1038/msb.2008.43. Epub 2008 Jul 15.

7.

Multiple functions of a feed-forward-loop gene circuit.

Wall ME, Dunlop MJ, Hlavacek WS.

J Mol Biol. 2005 Jun 10;349(3):501-14. Epub 2005 Apr 26.

PMID:
15890368
8.

The biphasic behavior of incoherent feed-forward loops in biomolecular regulatory networks.

Kim D, Kwon YK, Cho KH.

Bioessays. 2008 Nov;30(11-12):1204-11. doi: 10.1002/bies.20839.

PMID:
18937374
9.

Cross talking of network motifs in gene regulation that generates temporal pulses and spatial stripes.

Ishihara S, Fujimoto K, Shibata T.

Genes Cells. 2005 Nov;10(11):1025-38.

PMID:
16236132
10.

An extended transcriptional regulatory network of Escherichia coli and analysis of its hierarchical structure and network motifs.

Ma HW, Kumar B, Ditges U, Gunzer F, Buer J, Zeng AP.

Nucleic Acids Res. 2004 Dec 16;32(22):6643-9. Print 2004.

11.

The coherent feedforward loop serves as a sign-sensitive delay element in transcription networks.

Mangan S, Zaslaver A, Alon U.

J Mol Biol. 2003 Nov 21;334(2):197-204.

PMID:
14607112
12.

Biological role of noise encoded in a genetic network motif.

Kittisopikul M, Süel GM.

Proc Natl Acad Sci U S A. 2010 Jul 27;107(30):13300-5. doi: 10.1073/pnas.1003975107. Epub 2010 Jun 28.

13.

Response delays and the structure of transcription networks.

Rosenfeld N, Alon U.

J Mol Biol. 2003 Jun 13;329(4):645-54.

PMID:
12787666
14.

The cost of sensitive response and accurate adaptation in networks with an incoherent type-1 feed-forward loop.

Lan G, Tu Y.

J R Soc Interface. 2013 Jul 24;10(87):20130489. doi: 10.1098/rsif.2013.0489. Print 2013 Oct 6.

15.

Transcriptional regulatory networks in Saccharomyces cerevisiae.

Lee TI, Rinaldi NJ, Robert F, Odom DT, Bar-Joseph Z, Gerber GK, Hannett NM, Harbison CT, Thompson CM, Simon I, Zeitlinger J, Jennings EG, Murray HL, Gordon DB, Ren B, Wyrick JJ, Tagne JB, Volkert TL, Fraenkel E, Gifford DK, Young RA.

Science. 2002 Oct 25;298(5594):799-804.

16.

Single and multiple input modules in regulatory networks.

Konagurthu AS, Lesk AM.

Proteins. 2008 Nov 1;73(2):320-4. doi: 10.1002/prot.22053.

PMID:
18433061
17.

Comparative analysis of the transcription-factor gene regulatory networks of E. coli and S. cerevisiae.

Guzmán-Vargas L, Santillán M.

BMC Syst Biol. 2008 Jan 31;2:13. doi: 10.1186/1752-0509-2-13.

18.

Feed-forward loop circuits as a side effect of genome evolution.

Cordero OX, Hogeweg P.

Mol Biol Evol. 2006 Oct;23(10):1931-6. Epub 2006 Jul 12.

19.

A quantitative model of glucose signaling in yeast reveals an incoherent feed forward loop leading to a specific, transient pulse of transcription.

Kuttykrishnan S, Sabina J, Langton LL, Johnston M, Brent MR.

Proc Natl Acad Sci U S A. 2010 Sep 21;107(38):16743-8. doi: 10.1073/pnas.0912483107. Epub 2010 Sep 1.

20.

Network motifs in the transcriptional regulation network of Escherichia coli.

Shen-Orr SS, Milo R, Mangan S, Alon U.

Nat Genet. 2002 May;31(1):64-8. Epub 2002 Apr 22.

PMID:
11967538
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