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Items: 1 to 20 of 109

1.

An Alu transposition model for the origin and expansion of human segmental duplications.

Bailey JA, Liu G, Eichler EE.

Am J Hum Genet. 2003 Oct;73(4):823-34. Epub 2003 Sep 22.

2.

Shuffling of genes within low-copy repeats on 22q11 (LCR22) by Alu-mediated recombination events during evolution.

Babcock M, Pavlicek A, Spiteri E, Kashork CD, Ioshikhes I, Shaffer LG, Jurka J, Morrow BE.

Genome Res. 2003 Dec;13(12):2519-32.

3.

Analysis of the human Alu Ye lineage.

Salem AH, Ray DA, Hedges DJ, Jurka J, Batzer MA.

BMC Evol Biol. 2005 Feb 22;5:18.

4.

Evolutionary mechanisms shaping the genomic structure of the Williams-Beuren syndrome chromosomal region at human 7q11.23.

Antonell A, de Luis O, Domingo-Roura X, PĂ©rez-Jurado LA.

Genome Res. 2005 Sep;15(9):1179-88.

5.

Whole-genome analysis of Alu repeat elements reveals complex evolutionary history.

Price AL, Eskin E, Pevzner PA.

Genome Res. 2004 Nov;14(11):2245-52.

6.

Analysis of copy number variants and segmental duplications in the human genome: Evidence for a change in the process of formation in recent evolutionary history.

Kim PM, Lam HY, Urban AE, Korbel JO, Affourtit J, Grubert F, Chen X, Weissman S, Snyder M, Gerstein MB.

Genome Res. 2008 Dec;18(12):1865-74. doi: 10.1101/gr.081422.108. Epub 2008 Oct 8.

7.

The role of recombination in the origin and evolution of Alu subfamilies.

Teixeira-Silva A, Silva RM, Carneiro J, Amorim A, Azevedo L.

PLoS One. 2013 Jun 4;8(6):e64884. doi: 10.1371/journal.pone.0064884. Print 2013.

8.

Heterogeneous duplications in patients with Pelizaeus-Merzbacher disease suggest a mechanism of coupled homologous and nonhomologous recombination.

Woodward KJ, Cundall M, Sperle K, Sistermans EA, Ross M, Howell G, Gribble SM, Burford DC, Carter NP, Hobson DL, Garbern JY, Kamholz J, Heng H, Hodes ME, Malcolm S, Hobson GM.

Am J Hum Genet. 2005 Dec;77(6):966-87. Epub 2005 Oct 19.

9.

Alu elements and the human genome.

Rowold DJ, Herrera RJ.

Genetica. 2000;108(1):57-72. Review.

PMID:
11145422
10.

Active Alu element "A-tails": size does matter.

Roy-Engel AM, Salem AH, Oyeniran OO, Deininger L, Hedges DJ, Kilroy GE, Batzer MA, Deininger PL.

Genome Res. 2002 Sep;12(9):1333-44.

11.

Genome-wide target site triplication of Alu elements in the human genome.

Lee W, Mun S, Kang K, Hennighausen L, Han K.

Gene. 2015 May 1;561(2):283-91. doi: 10.1016/j.gene.2015.02.052. Epub 2015 Feb 19.

PMID:
25701601
12.

Gene conversion as a secondary mechanism of short interspersed element (SINE) evolution.

Kass DH, Batzer MA, Deininger PL.

Mol Cell Biol. 1995 Jan;15(1):19-25.

13.

Recently integrated Alu elements and human genomic diversity.

Salem AH, Kilroy GE, Watkins WS, Jorde LB, Batzer MA.

Mol Biol Evol. 2003 Aug;20(8):1349-61. Epub 2003 May 30.

14.

Biased distribution of inverted and direct Alus in the human genome: implications for insertion, exclusion, and genome stability.

Stenger JE, Lobachev KS, Gordenin D, Darden TA, Jurka J, Resnick MA.

Genome Res. 2001 Jan;11(1):12-27.

15.

Alu monomer revisited: recent generation of Alu monomers.

Kojima KK.

Mol Biol Evol. 2011 Jan;28(1):13-5. doi: 10.1093/molbev/msq218. Epub 2010 Aug 16.

16.

The contribution of alu elements to mutagenic DNA double-strand break repair.

Morales ME, White TB, Streva VA, DeFreece CB, Hedges DJ, Deininger PL.

PLoS Genet. 2015 Mar 11;11(3):e1005016. doi: 10.1371/journal.pgen.1005016. eCollection 2015 Mar.

17.

Alu repeats and human genomic diversity.

Batzer MA, Deininger PL.

Nat Rev Genet. 2002 May;3(5):370-9. Review.

PMID:
11988762
18.

The partial tandem duplication of ALL1 (MLL) is consistently generated by Alu-mediated homologous recombination in acute myeloid leukemia.

Strout MP, Marcucci G, Bloomfield CD, Caligiuri MA.

Proc Natl Acad Sci U S A. 1998 Mar 3;95(5):2390-5.

19.

Clustering, duplication and chromosomal distribution of mouse SINE retrotransposons.

Jurka J, Kohany O, Pavlicek A, Kapitonov VV, Jurka MV.

Cytogenet Genome Res. 2005;110(1-4):117-23.

PMID:
16093663
20.

Potential for retroposition by old Alu subfamilies.

Johanning K, Stevenson CA, Oyeniran OO, Gozal YM, Roy-Engel AM, Jurka J, Deininger PL.

J Mol Evol. 2003 Jun;56(6):658-64.

PMID:
12911029
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