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Items: 1 to 20 of 291

1.

Bacterial polymerase and yeast polymerase II use similar mechanisms for transcription through nucleosomes.

Walter W, Kireeva ML, Studitsky VM, Kashlev M.

J Biol Chem. 2003 Sep 19;278(38):36148-56. Epub 2003 Jul 8.

2.

Nucleosome remodeling induced by RNA polymerase II: loss of the H2A/H2B dimer during transcription.

Kireeva ML, Walter W, Tchernajenko V, Bondarenko V, Kashlev M, Studitsky VM.

Mol Cell. 2002 Mar;9(3):541-52.

3.

Construction, analysis, and transcription of model nucleosomal templates.

Walter W, Studitsky VM.

Methods. 2004 May;33(1):18-24.

PMID:
15039083
4.

Nature of the nucleosomal barrier to RNA polymerase II.

Kireeva ML, Hancock B, Cremona GH, Walter W, Studitsky VM, Kashlev M.

Mol Cell. 2005 Apr 1;18(1):97-108.

5.

Histone N-terminal tails interfere with nucleosome traversal by RNA polymerase II.

Ujvári A, Hsieh FK, Luse SW, Studitsky VM, Luse DS.

J Biol Chem. 2008 Nov 21;283(47):32236-43. doi: 10.1074/jbc.M806636200. Epub 2008 Sep 23.

6.

Role of C-terminal domain phosphorylation in RNA polymerase II transcription through the nucleosome.

Liu YV, Clark DJ, Tchernajenko V, Dahmus ME, Studitsky VM.

Biopolymers. 2003 Apr;68(4):528-38.

PMID:
12666177
7.

Changing the DNA landscape: putting a SPN on chromatin.

Formosa T.

Curr Top Microbiol Immunol. 2003;274:171-201. Review.

PMID:
12596908
8.

Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II.

Bondarenko VA, Steele LM, Ujvári A, Gaykalova DA, Kulaeva OI, Polikanov YS, Luse DS, Studitsky VM.

Mol Cell. 2006 Nov 3;24(3):469-79.

9.

How does Pol II overcome the nucleosome barrier?

Adelman K, Lis JT.

Mol Cell. 2002 Mar;9(3):451-2.

10.

Mechanism of nucleosome dissociation produced by transcription elongation in a short chromatin template.

Gallego F, Fernandez-Busquets X, Daban JR.

Biochemistry. 1995 May 23;34(20):6711-9.

PMID:
7756302
11.
12.

Visualizing RNA extrusion and DNA wrapping in transcription elongation complexes of bacterial and eukaryotic RNA polymerases.

Rivetti C, Codeluppi S, Dieci G, Bustamante C.

J Mol Biol. 2003 Mar 7;326(5):1413-26.

PMID:
12595254
14.
15.

Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II.

Hodges C, Bintu L, Lubkowska L, Kashlev M, Bustamante C.

Science. 2009 Jul 31;325(5940):626-8. doi: 10.1126/science.1172926.

16.

Synergistic action of RNA polymerases in overcoming the nucleosomal barrier.

Jin J, Bai L, Johnson DS, Fulbright RM, Kireeva ML, Kashlev M, Wang MD.

Nat Struct Mol Biol. 2010 Jun;17(6):745-52. doi: 10.1038/nsmb.1798. Epub 2010 May 9.

17.

Mechanism of transcription through a nucleosome by RNA polymerase II.

Kulaeva OI, Hsieh FK, Chang HW, Luse DS, Studitsky VM.

Biochim Biophys Acta. 2013 Jan;1829(1):76-83. doi: 10.1016/j.bbagrm.2012.08.015. Epub 2012 Sep 6. Review.

18.

Histone dynamics during transcription: exchange of H2A/H2B dimers and H3/H4 tetramers during pol II elongation.

Thiriet C, Hayes JJ.

Results Probl Cell Differ. 2006;41:77-90. Review.

PMID:
16909891
19.

RNA polymerase complexes cooperate to relieve the nucleosomal barrier and evict histones.

Kulaeva OI, Hsieh FK, Studitsky VM.

Proc Natl Acad Sci U S A. 2010 Jun 22;107(25):11325-30. doi: 10.1073/pnas.1001148107. Epub 2010 Jun 7.

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