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Items: 1 to 20 of 209

1.

BLAST2SRS, a web server for flexible retrieval of related protein sequences in the SWISS-PROT and SPTrEMBL databases.

Bimpikis K, Budd A, Linding R, Gibson TJ.

Nucleic Acids Res. 2003 Jul 1;31(13):3792-4.

3.

Gene2EST: a BLAST2 server for searching expressed sequence tag (EST) databases with eukaryotic gene-sized queries.

Gemünd C, Ramu C, Altenberg-Greulich B, Gibson TJ.

Nucleic Acids Res. 2001 Mar 15;29(6):1272-7.

4.

WU-Blast2 server at the European Bioinformatics Institute.

Lopez R, Silventoinen V, Robinson S, Kibria A, Gish W.

Nucleic Acids Res. 2003 Jul 1;31(13):3795-8.

5.

The SYSTERS Protein Family Database in 2005.

Meinel T, Krause A, Luz H, Vingron M, Staub E.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D226-9.

6.

BOV--a web-based BLAST output visualization tool.

Gollapudi R, Revanna KV, Hemmerich C, Schaack S, Dong Q.

BMC Genomics. 2008 Sep 15;9:414. doi: 10.1186/1471-2164-9-414.

7.

MyHits: a new interactive resource for protein annotation and domain identification.

Pagni M, Ioannidis V, Cerutti L, Zahn-Zabal M, Jongeneel CV, Falquet L.

Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W332-5.

8.

MRS: a fast and compact retrieval system for biological data.

Hekkelman ML, Vriend G.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W766-9.

9.
10.

ProFAT: a web-based tool for the functional annotation of protein sequences.

Bradshaw CR, Surendranath V, Habermann B.

BMC Bioinformatics. 2006 Oct 23;7:466.

11.

QSCOP-BLAST--fast retrieval of quantified structural information for protein sequences of unknown structure.

Suhrer SJ, Gruber M, Sippl MJ.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W411-5. Epub 2007 May 3.

12.

The HHpred interactive server for protein homology detection and structure prediction.

Söding J, Biegert A, Lupas AN.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W244-8.

13.

The ProDom database of protein domain families.

Corpet F, Gouzy J, Kahn D.

Nucleic Acids Res. 1998 Jan 1;26(1):323-6.

14.
15.

PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology.

Saebø PE, Andersen SM, Myrseth J, Laerdahl JK, Rognes T.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W535-9.

16.
17.

The EMBL Nucleotide Sequence Database.

Stoesser G, Baker W, van den Broek A, Camon E, Garcia-Pastor M, Kanz C, Kulikova T, Leinonen R, Lin Q, Lombard V, Lopez R, Redaschi N, Stoehr P, Tuli MA, Tzouvara K, Vaughan R.

Nucleic Acids Res. 2002 Jan 1;30(1):21-6.

18.

FFAS03: a server for profile--profile sequence alignments.

Jaroszewski L, Rychlewski L, Li Z, Li W, Godzik A.

Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W284-8.

19.

The EMBL Nucleotide Sequence Database.

Stoesser G, Tuli MA, Lopez R, Sterk P.

Nucleic Acids Res. 1999 Jan 1;27(1):18-24.

20.

ANTHEPROT: an integrated protein sequence analysis software with client/server capabilities.

Deléage G, Combet C, Blanchet C, Geourjon C.

Comput Biol Med. 2001 Jul;31(4):259-67.

PMID:
11334635
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