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Results: 1 to 20 of 417

1.

Sequence-based alignment of sorghum chromosome 3 and rice chromosome 1 reveals extensive conservation of gene order and one major chromosomal rearrangement.

Klein PE, Klein RR, Vrebalov J, Mullet JE.

Plant J. 2003 Jun;34(5):605-21. Erratum in: Plant J. 2003 Nov;36(3):430-2.

PMID:
12787243
[PubMed - indexed for MEDLINE]
2.

Sequence and analysis of rice chromosome 4.

Feng Q, Zhang Y, Hao P, Wang S, Fu G, Huang Y, Li Y, Zhu J, Liu Y, Hu X, Jia P, Zhang Y, Zhao Q, Ying K, Yu S, Tang Y, Weng Q, Zhang L, Lu Y, Mu J, Lu Y, Zhang LS, Yu Z, Fan D, Liu X, Lu T, Li C, Wu Y, Sun T, Lei H, Li T, Hu H, Guan J, Wu M, Zhang R, Zhou B, Chen Z, Chen L, Jin Z, Wang R, Yin H, Cai Z, Ren S, Lv G, Gu W, Zhu G, Tu Y, Jia J, Zhang Y, Chen J, Kang H, Chen X, Shao C, Sun Y, Hu Q, Zhang X, Zhang W, Wang L, Ding C, Sheng H, Gu J, Chen S, Ni L, Zhu F, Chen W, Lan L, Lai Y, Cheng Z, Gu M, Jiang J, Li J, Hong G, Xue Y, Han B.

Nature. 2002 Nov 21;420(6913):316-20.

PMID:
12447439
[PubMed - indexed for MEDLINE]
3.

A high-throughput AFLP-based method for constructing integrated genetic and physical maps: progress toward a sorghum genome map.

Klein PE, Klein RR, Cartinhour SW, Ulanch PE, Dong J, Obert JA, Morishige DT, Schlueter SD, Childs KL, Ale M, Mullet JE.

Genome Res. 2000 Jun;10(6):789-807.

PMID:
10854411
[PubMed - indexed for MEDLINE]
Free PMC Article
4.

Comparative DNA sequence analysis of mapped wheat ESTs reveals the complexity of genome relationships between rice and wheat.

La Rota M, Sorrells ME.

Funct Integr Genomics. 2004 Mar;4(1):34-46. Epub 2004 Jan 22.

PMID:
14740255
[PubMed - indexed for MEDLINE]
5.

A large rearrangement involving genes and low-copy DNA interrupts the microcollinearity between rice and barley at the Rph7 locus.

Brunner S, Keller B, Feuillet C.

Genetics. 2003 Jun;164(2):673-83.

PMID:
12807788
[PubMed - indexed for MEDLINE]
Free PMC Article
6.

Integration of hybridization-based markers (overgos) into physical maps for comparative and evolutionary explorations in the genus Oryza and in Sorghum.

Hass-Jacobus BL, Futrell-Griggs M, Abernathy B, Westerman R, Goicoechea JL, Stein J, Klein P, Hurwitz B, Zhou B, Rakhshan F, Sanyal A, Gill N, Lin JY, Walling JG, Luo MZ, Ammiraju JS, Kudrna D, Kim HR, Ware D, Wing RA, San Miguel P, Jackson SA.

BMC Genomics. 2006 Aug 8;7:199.

PMID:
16895597
[PubMed - indexed for MEDLINE]
Free PMC Article
7.

A plant-transformation-competent BIBAC/BAC-based map of rice for functional analysis and genetic engineering of its genomic sequence.

Li Y, Uhm T, Ren C, Wu C, Santos TS, Lee MK, Yan B, Santos F, Zhang A, Scheuring C, Sanchez A, Millena AC, Nguyen HT, Kou H, Liu D, Zhang HB.

Genome. 2007 Mar;50(3):278-88.

PMID:
17502901
[PubMed - indexed for MEDLINE]
8.

Fertility restorer locus Rf1 [corrected] of sorghum (Sorghum bicolor L.) encodes a pentatricopeptide repeat protein not present in the colinear region of rice chromosome 12.

Klein RR, Klein PE, Mullet JE, Minx P, Rooney WL, Schertz KF.

Theor Appl Genet. 2005 Oct;111(6):994-1012. Epub 2005 Aug 3. Erratum in: Theor Appl Genet. 2006 Jan;112(2):388.

PMID:
16078015
[PubMed - indexed for MEDLINE]
9.

The Sorghum bicolor genome and the diversification of grasses.

Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, Freeling M, Gingle AR, Hash CT, Keller B, Klein P, Kresovich S, McCann MC, Ming R, Peterson DG, Mehboob-ur-Rahman, Ware D, Westhoff P, Mayer KF, Messing J, Rokhsar DS.

Nature. 2009 Jan 29;457(7229):551-6. doi: 10.1038/nature07723.

PMID:
19189423
[PubMed - indexed for MEDLINE]
10.

Targeted analysis of orthologous phytochrome A regions of the sorghum, maize, and rice genomes using comparative gene-island sequencing.

Morishige DT, Childs KL, Moore LD, Mullet JE.

Plant Physiol. 2002 Dec;130(4):1614-25.

PMID:
12481045
[PubMed - indexed for MEDLINE]
Free PMC Article
11.

A BAC-based physical map of Brachypodium distachyon and its comparative analysis with rice and wheat.

Gu YQ, Ma Y, Huo N, Vogel JP, You FM, Lazo GR, Nelson WM, Soderlund C, Dvorak J, Anderson OD, Luo MC.

BMC Genomics. 2009 Oct 27;10:496. doi: 10.1186/1471-2164-10-496.

PMID:
19860896
[PubMed - indexed for MEDLINE]
Free PMC Article
12.

Structural characterization of Brachypodium genome and its syntenic relationship with rice and wheat.

Huo N, Vogel JP, Lazo GR, You FM, Ma Y, McMahon S, Dvorak J, Anderson OD, Luo MC, Gu YQ.

Plant Mol Biol. 2009 May;70(1-2):47-61. doi: 10.1007/s11103-009-9456-3. Epub 2009 Jan 29.

PMID:
19184460
[PubMed - indexed for MEDLINE]
13.

Sequence analysis of the long arm of rice chromosome 11 for rice-wheat synteny.

Singh NK, Raghuvanshi S, Srivastava SK, Gaur A, Pal AK, Dalal V, Singh A, Ghazi IA, Bhargav A, Yadav M, Dixit A, Batra K, Gaikwad K, Sharma TR, Mohanty A, Bharti AK, Kapur A, Gupta V, Kumar D, Vij S, Vydianathan R, Khurana P, Sharma S, McCombie WR, Messing J, Wing R, Sasaki T, Khurana P, Mohapatra T, Khurana JP, Tyagi AK.

Funct Integr Genomics. 2004 May;4(2):102-17. Epub 2004 Apr 14.

PMID:
15085449
[PubMed - indexed for MEDLINE]
14.

Macro- and microcolinearity between the genomic region of wheat chromosome 5B containing the Tsn1 gene and the rice genome.

Lu H, Faris JD.

Funct Integr Genomics. 2006 Apr;6(2):90-103. Epub 2005 Dec 22.

PMID:
16372189
[PubMed - indexed for MEDLINE]
15.

Mapping genes on an integrated sorghum genetic and physical map using cDNA selection technology.

Childs KL, Klein RR, Klein PE, Morishige DT, Mullet JE.

Plant J. 2001 Aug;27(3):243-55.

PMID:
11532170
[PubMed - indexed for MEDLINE]
16.

Development of genic-microsatellite markers for sorghum staygreen QTL using a comparative genomic approach with rice.

Srinivas G, Satish K, Murali Mohan S, Nagaraja Reddy R, Madhusudhana R, Balakrishna D, Venkatesh Bhat B, Howarth CJ, Seetharama N.

Theor Appl Genet. 2008 Jul;117(2):283-96. doi: 10.1007/s00122-008-0773-8. Epub 2008 Apr 26.

PMID:
18438637
[PubMed - indexed for MEDLINE]
17.

Gene content and virtual gene order of barley chromosome 1H.

Mayer KF, Taudien S, Martis M, Simková H, Suchánková P, Gundlach H, Wicker T, Petzold A, Felder M, Steuernagel B, Scholz U, Graner A, Platzer M, Dolezel J, Stein N.

Plant Physiol. 2009 Oct;151(2):496-505. doi: 10.1104/pp.109.142612. Epub 2009 Aug 19.

PMID:
19692534
[PubMed - indexed for MEDLINE]
Free PMC Article
18.

Analysis of the barley chromosome 2 region containing the six-rowed spike gene vrs1 reveals a breakdown of rice-barley micro collinearity by a transposition.

Pourkheirandish M, Wicker T, Stein N, Fujimura T, Komatsuda T.

Theor Appl Genet. 2007 May;114(8):1357-65. Epub 2007 Mar 21.

PMID:
17375281
[PubMed - indexed for MEDLINE]
19.

The genome sequence and structure of rice chromosome 1.

Sasaki T, Matsumoto T, Yamamoto K, Sakata K, Baba T, Katayose Y, Wu J, Niimura Y, Cheng Z, Nagamura Y, Antonio BA, Kanamori H, Hosokawa S, Masukawa M, Arikawa K, Chiden Y, Hayashi M, Okamoto M, Ando T, Aoki H, Arita K, Hamada M, Harada C, Hijishita S, Honda M, Ichikawa Y, Idonuma A, Iijima M, Ikeda M, Ikeno M, Ito S, Ito T, Ito Y, Ito Y, Iwabuchi A, Kamiya K, Karasawa W, Katagiri S, Kikuta A, Kobayashi N, Kono I, Machita K, Maehara T, Mizuno H, Mizubayashi T, Mukai Y, Nagasaki H, Nakashima M, Nakama Y, Nakamichi Y, Nakamura M, Namiki N, Negishi M, Ohta I, Ono N, Saji S, Sakai K, Shibata M, Shimokawa T, Shomura A, Song J, Takazaki Y, Terasawa K, Tsuji K, Waki K, Yamagata H, Yamane H, Yoshiki S, Yoshihara R, Yukawa K, Zhong H, Iwama H, Endo T, Ito H, Hahn JH, Kim HI, Eun MY, Yano M, Jiang J, Gojobori T.

Nature. 2002 Nov 21;420(6913):312-6.

PMID:
12447438
[PubMed - indexed for MEDLINE]
20.

New in silico insight into the synteny between rice (Oryza sativa L.) and maize (Zea mays L.) highlights reshuffling and identifies new duplications in the rice genome.

Salse J, Piégu B, Cooke R, Delseny M.

Plant J. 2004 May;38(3):396-409. Erratum in: Plant J. 2004 Jun;38(5):873.

PMID:
15086801
[PubMed - indexed for MEDLINE]

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